Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2405 ATGTTAGTGAAAGAAGGAACTGGGAAGACCACTTTAGCCGTAGGTGATGTTGCAAATGATGTTGGCGTTATACAAGAAGTTGAAATTGTTGTTGGAATAAGTAGGGTTGAAGGTGCTACCAAAGGAACTGATATCATTATTCCAACTAATGTTCTTGCGTGGGGAGGATTTGGAATTGTTGCAAGGCTTATGATGTGGGCATATAGAGTGATAGCTACAATTGGAAAGAAAATTACAGTACTTACACCAAGAAGATGA 258 0.3876 MLVKEGTGKTTLAVGDVANDVGVIQEVEIVVGISRVEGATKGTDIIIPTNVLAWGGFGIVARLMMWAYRVIATIGKKITVLTPRR 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2405 85 PANTHER PHOSPHATE TRANSPORTER 16 85 IPR001204 GO:0005315|GO:0006817|GO:0016020
Ssu5g2405 85 Gene3D - 1 51 IPR023214 -
Ssu5g2405 85 PANTHER PHOSPHATE TRANSPORTER 16 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2405 Ssu-Chr5 67081288 67082695 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g2405 16 85 Inorganic Solute Cotransporters AT3G26570 57.143 6.41e-18 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2405 K14640 - gmx:100787472 85.5001