Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2402 ATGCACCTACAACTTGGTGAAAAGCCACACATAATAGTCTCTTCAGCAGATATAGCCAAAGAGATTATGAAAACGCATGATGCTATCTTTGCTAATAGGCCTCAGCTTCTTGCTTCCAAATTCTTTGTTTATGATAGCTGCGACATAGCCTTTTCTTCTTATGGAAGAACTTGGAggcaactaaaaaaaatatgcatttcaGAGTTGTTAAATGCAAAGCATGTTCAATCACTGAGGCACATAAGAGAAGATGAGGTATCTaaactagttaaaaatatatatgcaaacGAAGGATCAATTATCAACCTTACTAAGGAAATTGAGTCGGTGACAAATGCTATAATTGCAAGGGCAGCTAATGGTAAAAGGTGCAAAGACCAAGAAGCTTTCATATCAACCATGGAGCAAATGCTAGAGCTCTTGGGAGGTTTCTCAATTGCTGATTTCTACCCTTCAATCAAAGTGATTCCTTTGCTTACAGGAATCAAAACTAAACTTGAAAGGGCGCAGAGAGAGAATGACAAGATCCTAGAAAATATGGTCAAGGATCACATGGAAAATAAGAACAGCCATGTGGAGACGCAGGAGGATTTTATTGATATTCTtctcaaaactcaaaagaaagGTGACTTAGAAATTCCCTTGACTCACAACAACATCAAAGCAGTCATCTGGGACATGTTTGTTGGGGGGACCGCAGCACCGACGTCAGTTACAATATGGGCAATGTCAGAACTCATGAAAAATCCTAATGTTATGGAAAAGGCACAGACTGAGGTAAGAAAGGTCTTTAATATTAAAGGTTATGTAGATGAAACAGACCTTGGACAGTGTCAATACTTACATTCAGTGATAAAAGAAACCTTGAGGCTACACCCCCCTGAAGCATTATTAGTTCCAAGAGAAAACAGTGAGGTATGTGTAATCAATGGATATCAAATACCTGCAAAGAGCAAAGTCATTATCAATGCTTGGGCCATTGGAAGAAATCCAAAGTATTGGAATGAAGCAGAGACATTTGTGCCAGAGAGATTTCTAGATAACTCTGTTGATTTCAATGGCACAAACTTTGAATACATTCCCTTTGGCGCTGGAAGGAGAATATGTCCAGGAGCTGCATTTTCCATGCGTAACATGTTGCTGTCACTGGCCAATTTGCTTTATCATTTTGATTGGGAGCTGCCAAATGGAACAAACCCCCAAGAATTGGACATGACTGAGTCTTTTGGCCTTACAGTTAAAAGAGCAAATGATTTGTGCTTAATGCCCATTCCTTATCACCCAACCGCACTGGGCCACCAATAA 1305 0.3801 MHLQLGEKPHIIVSSADIAKEIMKTHDAIFANRPQLLASKFFVYDSCDIAFSSYGRTWRQLKKICISELLNAKHVQSLRHIREDEVSKLVKNIYANEGSIINLTKEIESVTNAIIARAANGKRCKDQEAFISTMEQMLELLGGFSIADFYPSIKVIPLLTGIKTKLERAQRENDKILENMVKDHMENKNSHVETQEDFIDILLKTQKKGDLEIPLTHNNIKAVIWDMFVGGTAAPTSVTIWAMSELMKNPNVMEKAQTEVRKVFNIKGYVDETDLGQCQYLHSVIKETLRLHPPEALLVPRENSEVCVINGYQIPAKSKVIINAWAIGRNPKYWNEAETFVPERFLDNSVDFNGTNFEYIPFGAGRRICPGAAFSMRNMLLSLANLLYHFDWELPNGTNPQELDMTESFGLTVKRANDLCLMPIPYHPTALGHQ 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2402 434 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 362 371 IPR017972 GO:0005506|GO:0016705
Ssu5g2402 434 PRINTS P450 superfamily signature 360 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2402 434 PRINTS P450 superfamily signature 283 294 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2402 434 PRINTS P450 superfamily signature 230 247 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2402 434 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2402 434 Pfam Cytochrome P450 2 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2402 434 SUPERFAMILY Cytochrome P450 2 424 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2402 434 Gene3D Cytochrome P450 1 421 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2402 434 PANTHER CYTOCHROME P450 71B11-RELATED 1 426 - -
Ssu5g2402 434 Coils Coil 159 179 - -
Ssu5g2402 434 PRINTS E-class P450 group I signature 219 236 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2402 434 PRINTS E-class P450 group I signature 369 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2402 434 PRINTS E-class P450 group I signature 282 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2402 434 PRINTS E-class P450 group I signature 18 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2402 434 PRINTS E-class P450 group I signature 323 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2402 434 PRINTS E-class P450 group I signature 239 265 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2402 434 PRINTS E-class P450 group I signature 359 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2402 434 PANTHER CYTOCHROME P450 71D10 1 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2402 Ssu-Chr5 67035621 67038320 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g2402 1 423 Cytochrome P450 AT3G26310 39.815 6.86e-116 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2402 - K23806 gmx:100779120 760.37