Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2392 ATGAGGCAACCAAGTCCAACCATTCATTTTCTCCTCCAAATTCTTCTTGTCTGTCTACTGCACAGACCCAGCTTTGCAGTGAAAAAGTCATATGTGGTGTACTTGGGAGCCCACTCACACGGCCCAGAATTGTCTTCAGTTGACTTCAATCAAGTGACACAGTTCCACCATGAGTTTCTGGGGTCTTTCTTAGGAAGTTCTGATACAGCCAAGGACTCCATCTTTTATTCATACACAAGGCACATCAATGGTTTTGCTGCAACTTTGGAAGAAGAAGTAGCTGCTGAGATAGCAAAACATCCCAAAGTATTGTCAGTGTTCGAGAACCGTGGGAGAAAGCTACACACCACTCGGTCATGGGGATTCATGGGGCTAGAGCATAATGGGGTGATCTCATCCAGCTCAATCTGGAAGAAAGCCAGATTTGGTGAGGGTGTGATCATAGGGAACCTGGACACAGGTGTTTGGCCTGAATCAAAGAGCTTTAGTGAGGAAGGATTGGGACCAGTTCCATCAAAGTGGAGAGGAATCTGTGAGAACGGAATTGATCATACTTTTCACTGCAACAGGAAGCTAATTGGGGCAAGGTACTTCAACAAGGGGTACGCCTCTGTGGCTGGCCCGCTGAACTCCTCGTTTGACTCGCCACGTGACAGGGAGGGGCACGGGTCCCACACCCTATCCACAGCTGGCGGGAACATGGTGGCTGGGGTCAGCGTGTTCGGGCAAGGCTACGGAACAGCGAAGGGTGGCTCACCAAAAGCCCGTGTGGCAGCCTACAAGGTTTGCTGGCCCCCCGTTGGCGGTGACGAGTGCTTTGACGCTGATATTTTGGCAGGCTTCGACATGGCCATCCATGACGGTGTCCATGTCTTGTCTCTCTCGCTCGGCGGCTCTGCCTCTTCCTTTTTCAATGACAGTGTCGCCATTGGATCCTTCCATGCCGCCAACCATGGCATTGTGGTCGTTTGCTCTGCCAGCAATAGTGGGCCTGCGGATGCCACCGCCGAAAATCTTGCACCCTGGCATATTACGGTGGCTGCCAGCACCATGGATAGACAGTTCCCCGCTTATGTTGTCCTTGGTAACAATATGACCTTCAAGGGCGAAAGCTTATCGTCTGCAAGATTGGCACACAAGTTCTACCCAATTATTAAAGCTACAGATGCTAAATTGGCGAGCGCAAGAGCTGAAGATGCGGTGTTGTGCCAGAATGGAACTCTGGATCCCAACAAGGTGAAGGGAAAGATCGTGGTGTGTCTCCGAGGTATAAATGCGAGAGTGGACAAGGGAGAGCAAGCTTTCCTGGCTGGCGCTGTGGGAATGGTCCTTGCTAATGACAAGACTAGTGGCAATGAAATTTTAGCTGATCCTCATGTCCTTCCTGCTTCACATATCAATTTCTCTGATGGTCGTGCTGTCTATAATTACATCAACTCAACCAAATTCCCAGTGGCATATATTACACATCCAAAGACTCAATTGCATACTAAGCCAGCCCCGATGATGGCAGCATTTTCATCAAAAGGACCAAATACTATCGTGCCAGAGATCCTGAAGCCCGATGTCACTGCACCAGGAGTGTCAGTTATAGCGGCCTATACTGAAGCCCAAGGACCAACTAATCAAGTGTTCGACAAGCGCCGGATTCCATATAACTCGGTATCCGGCACATCAATGTCGTGTCCTCACGTTGCGGGCATTGTGGGACTGTTGAGAACCTTGTATCCTTCGTGGAGTCCTGCTGCTATTAAATCAGCAATCATGACCACGGCTACAACACTAGATAATGAGGTGGAGCCGCTACTGAATGCTACTGATGGCCAGGCAACACCATTCAGTTGCGGGGCAGGACATGTTCAACCAAACAGAGCAATGGATCCCGGGCTTGTTTATGACACAACAATTAATGATTACCTTAACTTCTTGTGTGCTTTAGGTTACAACGAGACACAGATCTCAGTGTTTTCTCAAGGTCCATATCAATGCCGCAAGAAATTTAGTCTCCTCAACCTGAACTATCCCTCAATCACAGTCCCAAATCTCTCTGGGTCAGTAACAGTTACAAGGACATTAAAAAATGTCGGTTCTCCGGCAACGTACATTGCTCATGTTCGAAACCCGAATGGAATCACCGTTTCTGTGAAGCCAAACATTTTGAAGTTCAAAAATGCTGGCGAAGAAAAGAGCTTTAAAGTAACCTTGAAGGCCAAGCAAGGAAAGGCCTCAAATAACTACGTGTTTGGAAAACTGATATGGTCAGATGGCGACCATTACGTTATCAGTCCTATAGTTGTGAAGGCCCTCTTAACTAAAAATTGA 2322 0.4819 MRQPSPTIHFLLQILLVCLLHRPSFAVKKSYVVYLGAHSHGPELSSVDFNQVTQFHHEFLGSFLGSSDTAKDSIFYSYTRHINGFAATLEEEVAAEIAKHPKVLSVFENRGRKLHTTRSWGFMGLEHNGVISSSSIWKKARFGEGVIIGNLDTGVWPESKSFSEEGLGPVPSKWRGICENGIDHTFHCNRKLIGARYFNKGYASVAGPLNSSFDSPRDREGHGSHTLSTAGGNMVAGVSVFGQGYGTAKGGSPKARVAAYKVCWPPVGGDECFDADILAGFDMAIHDGVHVLSLSLGGSASSFFNDSVAIGSFHAANHGIVVVCSASNSGPADATAENLAPWHITVAASTMDRQFPAYVVLGNNMTFKGESLSSARLAHKFYPIIKATDAKLASARAEDAVLCQNGTLDPNKVKGKIVVCLRGINARVDKGEQAFLAGAVGMVLANDKTSGNEILADPHVLPASHINFSDGRAVYNYINSTKFPVAYITHPKTQLHTKPAPMMAAFSSKGPNTIVPEILKPDVTAPGVSVIAAYTEAQGPTNQVFDKRRIPYNSVSGTSMSCPHVAGIVGLLRTLYPSWSPAAIKSAIMTTATTLDNEVEPLLNATDGQATPFSCGAGHVQPNRAMDPGLVYDTTINDYLNFLCALGYNETQISVFSQGPYQCRKKFSLLNLNYPSITVPNLSGSVTVTRTLKNVGSPATYIAHVRNPNGITVSVKPNILKFKNAGEEKSFKVTLKAKQGKASNNYVFGKLIWSDGDHYVISPIVVKALLTKN 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2392 773 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Ssu5g2392 773 PRINTS Subtilisin serine protease family (S8) signature 218 231 IPR015500 -
Ssu5g2392 773 PRINTS Subtilisin serine protease family (S8) signature 556 572 IPR015500 -
Ssu5g2392 773 Pfam Peptidase inhibitor I9 30 115 IPR010259 -
Ssu5g2392 773 PANTHER PEPTIDASE S8 15 768 - -
Ssu5g2392 773 SUPERFAMILY Subtilisin-like 114 630 IPR036852 GO:0004252|GO:0006508
Ssu5g2392 773 SUPERFAMILY PA domain 399 483 IPR046450 -
Ssu5g2392 773 ProSitePatterns Serine proteases, subtilase family, serine active site. 557 567 IPR023828 -
Ssu5g2392 773 Gene3D - 352 496 - -
Ssu5g2392 773 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 115 IPR037045 -
Ssu5g2392 773 CDD Peptidases_S8_3 113 593 IPR034197 -
Ssu5g2392 773 Gene3D Peptidase S8/S53 domain 145 639 IPR036852 GO:0004252|GO:0006508
Ssu5g2392 773 CDD PA_subtilisin_like 358 488 - -
Ssu5g2392 773 Pfam Fibronectin type-III domain 671 766 IPR041469 -
Ssu5g2392 773 Pfam PA domain 403 473 IPR003137 -
Ssu5g2392 773 ProSiteProfiles Serine proteases, subtilase domain profile. 119 626 - -
Ssu5g2392 773 Gene3D - 643 769 - -
Ssu5g2392 773 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 15 768 - -
Ssu5g2392 773 Pfam Subtilase family 143 600 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2392 Ssu-Chr5 66833004 66841652 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g2392 30 767 Subtilisin-like Serine Gene Family AT2G04160 65.452 0.0 1007
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2392 - - gmx:100788007 1428.31