Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2377 ATGGATCCAGGACTCATATATGATATCACCACTGAGGATTATATCCAATTCCTATGTTCCATGGGTCACAGTAGTGCATCCATTAGCAAAGTGACCAAGACCACCACAAGTTGTAAGAAAGAAAAACACCAAGCACTGAACCTTAACCTTCCTTCCATATCAGTTCCAAGCCTGAAGAGGGCTTCAACAGTAATGAGAACAGTGACAAACGTGGGAAACATATCTGCAGTCTACAAAGCTCTAGTGAAGGCTCCATATGGCATAAAAGTGAGAGTGGAACCTCAAACTTTGAGTTTCAATTCAGGTACCCGAGTCCTTACTTTCAATGTCAGTTTCATGTCAACTCAAAAGTTGCATGGAGATTACAAATTTGGGAGCCTAACATGGACAGATGGCAAGCATTTTGTGAGGTCCCCAATTGCTGTGAGGACCAAACAGTTTGAATCTTAA 450 0.4178 MDPGLIYDITTEDYIQFLCSMGHSSASISKVTKTTTSCKKEKHQALNLNLPSISVPSLKRASTVMRTVTNVGNISAVYKALVKAPYGIKVRVEPQTLSFNSGTRVLTFNVSFMSTQKLHGDYKFGSLTWTDGKHFVRSPIAVRTKQFES 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2377 149 Gene3D - 18 145 - -
Ssu5g2377 149 PANTHER SUBTILISIN-LIKE PROTEASE SBT3.1-RELATED 2 148 - -
Ssu5g2377 149 PANTHER PEPTIDASE S8 2 148 - -
Ssu5g2377 149 Pfam Fibronectin type-III domain 47 142 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2377 Ssu-Chr5 66656863 66657312 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g2377 2 147 Subtilisin-like Serine Gene Family AT5G11940 48.649 6.40e-43 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2377 - - gmx:100792709 254.218