Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2376 ATGGATACTAGTTCAAGAAACTGGAGATGGGCAAGAAAGGCCCAATTGCTTGTGGCTTCTGCTCTTCTTTTACTGCAAAACTCTCTGGTCATCTCTGCAGAGGCAAGCTCTGTGCACATTGTATACATGGGAGATAAGATATATCAAAATCCACAAACTACTAAAAGGTATCACCACAAAATTTTATCATCACTCCTAGGAAGCAAAGAAGCTGCAAAGAATTCGATTCTTTACAGCTATAAGCATGGTTTTTCAGGGTTTGCTGCAAGATTGACAAAATATCAAGCAGAAGCAATAGCGAAGTTTCCTGGGGTAGTTTCTGTCATTCCAAATGGCATTCACAAACTCCATACAACCAGAAGCTGGGACTTTATAGGGATCCATCATTCCACTTCAAAAACTTCTTTCTCTGGCAGCAACTTAGGTGAAGGAACTATCATTGGTGTCATAGACACAGGCATTTGGCCAGAGTCTCCAAGTTTCAATGATGAAGCAATGGGACAAATCCCATCAAGGTGGAAAGGAGTTTGTCAAGGGGGAGAGCACTTCAACTCCAGCAATTGCAACAAGAAAATAATAGGTGCTAGATGGTTCATGAAAGGAATAACTGATGAGGCTAAGAAACTCCTCCAAGGAAACAACACTAGTGAATATCTCTCAGCAAGAGATGCTGTTGGCCATGGCACTCATACAGCCTCTACAGCAGCTGGTTACTTTGTAGGAAATGCAAATTATAGAGGACTTGCTTCTGGTTTAGCCAGAGGAGGAGCACCCTTGGCCCACTTAGCTATCTACAAGGCTTGTTGGGACTTTCCAATTGGAGATTGTACTGATGCTGATATCCTGAAAGCTTTTGACAAGGCTATACATGATGGAGTTGATGTCTTAACTGTTTCTCTTGGCTTTGCCATTCCCTTGTACTCCTATATTGATCAACGTGATGCAATAGCAATTGGTTCCTTTCATGCAACTGCTAAGGGAATCACAGTTGTCTGTTCTGCTGGAAATTCTGGTCCTCTCTCTCAAACCGTTACAAATACTGCACCATGGATCATCACAGTTGGGTCTACCACAATAGATAGGGCCTTTCCAGCAACCATCACCCTTGGAAATAACCGCACTGTGTGGGGACAGTCTATTGATACTGGAAAACATAATCTTGGATCTGTTGGGCTCACATATTCTGAACGCATTGCTCTAGACCCATCAGATAATTTGGCCAAGGATTGTCAATCTGGAAGTCTAAATGCAACAATGGCAGCAGGCAAAATTGTTCTATGCTTTTCACTATCAGATCAACAGGACATTGTTTCTGCATCACTTACGGTCAAGGAAGCTGGAGGAGTTGGACTAGTATACGCACAATATCATGAAGATGGACTCGATCAATGTGGTTTGTTTCCATGTATTAAGGTAGATTATGAAGTGGGGACACAGATATTAACCTATGTTAGAAGATCAAGGTTTCCAACAGCAAGCCTAAGTTTTCCAAAGACAGTTATTGGAAAATGGATATCTCCTCGAGTTGCATCTTTCTCATCCAGAGGACCCAGTAGCATGTCTCCAACAGTGCTAAAGCCTGACATAGCTGCACCAGGTGTGGACATTTTGGCTGCATTTCCACCAAAGGGTACTTCAAAGAGCAGTGGGTTTGCATTCTTATCTGGAACTTCAATGTCTTGTCCCCATGTGGCAGGAATAGCAGCTCTCATCAAATCCAAACACCCAACTTGGTCACCTGCAGCCATAAGATCAGCTTTGGTAACAACAGGTGAGTCAGTGGGAGTCAACACATTAAAGTTACATCTTTACATATAG 1818 0.4257 MDTSSRNWRWARKAQLLVASALLLLQNSLVISAEASSVHIVYMGDKIYQNPQTTKRYHHKILSSLLGSKEAAKNSILYSYKHGFSGFAARLTKYQAEAIAKFPGVVSVIPNGIHKLHTTRSWDFIGIHHSTSKTSFSGSNLGEGTIIGVIDTGIWPESPSFNDEAMGQIPSRWKGVCQGGEHFNSSNCNKKIIGARWFMKGITDEAKKLLQGNNTSEYLSARDAVGHGTHTASTAAGYFVGNANYRGLASGLARGGAPLAHLAIYKACWDFPIGDCTDADILKAFDKAIHDGVDVLTVSLGFAIPLYSYIDQRDAIAIGSFHATAKGITVVCSAGNSGPLSQTVTNTAPWIITVGSTTIDRAFPATITLGNNRTVWGQSIDTGKHNLGSVGLTYSERIALDPSDNLAKDCQSGSLNATMAAGKIVLCFSLSDQQDIVSASLTVKEAGGVGLVYAQYHEDGLDQCGLFPCIKVDYEVGTQILTYVRRSRFPTASLSFPKTVIGKWISPRVASFSSRGPSSMSPTVLKPDIAAPGVDILAAFPPKGTSKSSGFAFLSGTSMSCPHVAGIAALIKSKHPTWSPAAIRSALVTTGESVGVNTLKLHLYI 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2376 605 ProSiteProfiles Serine proteases, subtilase domain profile. 121 605 - -
Ssu5g2376 605 Gene3D Peptidase S8/S53 domain 144 594 IPR036852 GO:0004252|GO:0006508
Ssu5g2376 605 ProSitePatterns Serine proteases, subtilase family, serine active site. 556 566 IPR023828 -
Ssu5g2376 605 SUPERFAMILY Subtilisin-like 116 595 IPR036852 GO:0004252|GO:0006508
Ssu5g2376 605 Pfam Peptidase inhibitor I9 38 117 IPR010259 -
Ssu5g2376 605 PANTHER PEPTIDASE S8 25 591 - -
Ssu5g2376 605 CDD Peptidases_S8_3 114 590 IPR034197 -
Ssu5g2376 605 PANTHER SUBTILISIN-LIKE PROTEASE SBT3.1-RELATED 25 591 - -
Ssu5g2376 605 Pfam Subtilase family 142 597 IPR000209 GO:0006508|GO:0008236
Ssu5g2376 605 CDD PA_subtilisin_like 366 494 - -
Ssu5g2376 605 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 27 117 IPR037045 -
Ssu5g2376 605 Gene3D - 360 501 - -
Ssu5g2376 605 PRINTS Subtilisin serine protease family (S8) signature 223 236 IPR015500 -
Ssu5g2376 605 PRINTS Subtilisin serine protease family (S8) signature 555 571 IPR015500 -
Ssu5g2376 605 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2376 Ssu-Chr5 66653169 66656714 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g2376 32 590 Subtilisin-like Serine Gene Family AT1G32960 52.548 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2376 - - gmx:100792709 1105.12