Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2322 ATGGGCTCTATGGCTCACGCAAAACTCGCTGCTCTAGCCGCTTCGTTGAACGCAAAGAGGTTAATGGCGCTGAGTCTTGGAGCCACTCCAGTTGTTATAAGCAGCCACCCCGAGACCGCTAGAGAAATTCTATTCGGGTCATCGTTCTCGAACCGTCCGATCAAAGAGTCAGCGCGCACTCTCATGTTCGAGCGCGCCATTGGTTTCGCTCCTTCTGGAACCTACTGGCGACACCTACGCAGGATCGCGGCCTTCCACATGTTCTCTCCGAGGAGGATTCAGGGCCTGGAGAGTCTCCGGCAGCGCGTGGCGGACGAAATGGTGAAGAGCGCGTGGAAGGAGATGGAGGAGAAAGGGGTGGTGGAAGTTCGGGGTGTGTTTCAGGAAGGGTCTCTCTGCAATATTTTGGAGAGTGTGTTTGGGAGCAATGATAGGAGTGGGGAGTTGGGTGATATGGTTAAGGAAGGGTATGAGTTGATTGCAAAGTTTAATTTGGAAGACTATTTTCCTCTAAAGTTTTTGGACTTTCATGGGGTGAAAAGAAGGTGCCACAAGTTGGCGGCTAGGGTTACTAGCGTGGTGGGGCAAATTGTGGAGGAACGAAAAAGTGATGGGGAGTTTGTTGGGAAGAAtgattttcttagcactttgcTATCTTTGCTCAAAGAAGAAAGGTTGGGTGATTCAGATATGGTGGCTATTCTGTGGGAAATGGTATTTCGAGGAACAGACACGGTTGCTATACTCTTGGAATGGATCATGGCCAGGATGGTTTTACACCCTGACGTACAAAAGAAAGCCCGCGAAGAAATTGACACGTGCGTGGGCCAAAACAGTCACGTGCGTGACTCGGATATTCCGAATCTGCCTTACCTACAGGCCATAGTGAAAGAAGTTCTTCGGTTGCACCCACCGGGCCCACTACTATCGTGGGCCCGCCTCGCAGTCCACGACGTCCACGTGGATAAGGTCCTTGTGCCAGCTGGCACGACAGCAATGGTTAACATGTGGGCCATATCGCATGACTCGTCCATCTGGGAAGACCCGTGGGCTTTCAAGCCCGAGAGGTTCCTGAAGGAAGACGTTTCCATCATGGGATCGGACTTGAGGCTTGCACCGTTCGGGGCCGGACGTAGGGTGTGCCCGGGTAGGGCCTTGGGCCTGGCCACGGCCCATCTCTGGCTCGCGCAACTTCTTCGCCACTTCATATGGCTTCCCGCGCAACCTGTGGATCTTTCGGAATGCCTTAGGCTTTCCATGGAAATGAAGACACCTCTGCGATGTCTAGTGGTTcgcagataa 1302 0.5184 MGSMAHAKLAALAASLNAKRLMALSLGATPVVISSHPETAREILFGSSFSNRPIKESARTLMFERAIGFAPSGTYWRHLRRIAAFHMFSPRRIQGLESLRQRVADEMVKSAWKEMEEKGVVEVRGVFQEGSLCNILESVFGSNDRSGELGDMVKEGYELIAKFNLEDYFPLKFLDFHGVKRRCHKLAARVTSVVGQIVEERKSDGEFVGKNDFLSTLLSLLKEERLGDSDMVAILWEMVFRGTDTVAILLEWIMARMVLHPDVQKKAREEIDTCVGQNSHVRDSDIPNLPYLQAIVKEVLRLHPPGPLLSWARLAVHDVHVDKVLVPAGTTAMVNMWAISHDSSIWEDPWAFKPERFLKEDVSIMGSDLRLAPFGAGRRVCPGRALGLATAHLWLAQLLRHFIWLPAQPVDLSECLRLSMEMKTPLRCLVVRR 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2322 433 PRINTS E-class P450 group I signature 250 276 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2322 433 PRINTS E-class P450 group I signature 371 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2322 433 PRINTS E-class P450 group I signature 381 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2322 433 PRINTS E-class P450 group I signature 293 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2322 433 PRINTS E-class P450 group I signature 335 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2322 433 PRINTS E-class P450 group I signature 15 34 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2322 433 PRINTS E-class P450 group I signature 230 247 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2322 433 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 374 383 IPR017972 GO:0005506|GO:0016705
Ssu5g2322 433 Pfam Cytochrome P450 21 412 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2322 433 PANTHER CYTOCHROME P450 FAMILY PROTEIN, EXPRESSED 1 433 - -
Ssu5g2322 433 PRINTS P450 superfamily signature 294 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2322 433 PRINTS P450 superfamily signature 372 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2322 433 PRINTS P450 superfamily signature 241 258 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2322 433 SUPERFAMILY Cytochrome P450 20 433 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2322 433 PANTHER CYTOCHROME P450 78A7-RELATED 1 433 - -
Ssu5g2322 433 Gene3D Cytochrome P450 1 430 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2322 Ssu-Chr5 65755329 65757553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g2322 2 433 Cytochrome P450 AT1G13710 56.000 2.03e-173 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2322 - - gmx:100817944 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1813 9 55466565 55468644 Ssu5g2322 5 65755329 65757553 PCT