Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2117 ATGGCGAGGAACTGGGTGGTTCGATCCTTGGCGCTTGGCCACGCAATAAAGAATAGGGTTCGCCCACTCTTCTTCAACGCTCACCACCGCCTTCCCTCACTCCCGTCCAAATCCTCTCTCTTCGCCACCGCCACCGTCACTGCCTCCTCTCAGCTCTCCCTCCTCCCCTCCTTCCATCACTCCCACTCTTTCTCCTCCGCCGCAgCTCCTTCCGACGTTGTCCTTGTTAATTCGGAGGAAGAGTTCAACAATATCCTTACCAAAGTCCAAGATAACTCGTTGCACGCCATCTTCTATTTCACTGCAGTTTGGTGTGGACCTTGCAGGTTTATTTCTCCTATAGTTGGGGAGCTCAGTAAGAAGTACCCTCATGTAACCACATATAAGATTGACATTGATCAGGAAGCAATTCAAGGCACATTGGGCAAGTTGCAGATTACATCTGtgCCAACacttcatttctttcaaaatggGAAAAAGGCTGATGAGCTTATGGGCGCTGATGTTGCACGATTGAACTATATCACAGAGAAACTCTTCAAGAAAGACTGA 552 0.4728 MARNWVVRSLALGHAIKNRVRPLFFNAHHRLPSLPSKSSLFATATVTASSQLSLLPSFHHSHSFSSAAAPSDVVLVNSEEEFNNILTKVQDNSLHAIFYFTAVWCGPCRFISPIVGELSKKYPHVTTYKIDIDQEAIQGTLGKLQITSVPTLHFFQNGKKADELMGADVARLNYITEKLFKKD 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2117 183 SUPERFAMILY Thioredoxin-like 66 168 IPR036249 -
Ssu5g2117 183 PANTHER THIOREDOXIN 1 181 - -
Ssu5g2117 183 Pfam Thioredoxin 74 168 IPR013766 -
Ssu5g2117 183 PANTHER THIOREDOXIN O1, MITOCHONDRIAL 1 181 - -
Ssu5g2117 183 ProSiteProfiles Thioredoxin domain profile. 63 181 IPR013766 -
Ssu5g2117 183 Gene3D Glutaredoxin 68 181 - -
Ssu5g2117 183 CDD TRX_family 80 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2117 Ssu-Chr5 61381043 61385789 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2117 K03671 - gmx:100799935 285.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g2117 5 61381043 61385789 Ssu5g2117 5 61381043 61385789 ECH