Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2106 ATGCTTAACAGGAACTGGGTTTTAAAGCGTAAGCGGAGAAAACTTCATTTAGGACTAGATCAGTCCTCTGGTAAAGAGCAATCCAAcagtaaagaagaaaattcaaTAACATCTGAATCTTCTAGGAGTGCTTCAGCTAAACGTGTGCTCAAGACTGAAGTGGCTTCTGATCAAATTTCATCtaagaagaaaggaaatgaTGGGTATTACTATGAATGTGTGATCTGTGATGTTGGTGGCAACTTATTGTGTTGTGATAGCTGTCCTCGCACTTATCATTTACAATGTCTTGACCCCCCTCTTAAGCGCATCCCTAATGGGAAGTGGCAATGTCCAAGTTGCTTTGAAGGAAATGATCAACTAAAGCCCATAAACCACCTGGATCCAATTTCAAAACGAGCAAGGACAAAGATTGTCACTGCAAAATCAAAAGGTCAAGTTAACTCACTTAACCTTGAAAAAGTATCTGGACTTTTTGGAAGTAAGCTTATTTCAAAGAAAAGGTCCTCAAGCAAAGGAAAATCTATTTCAACTATGGGGGtcaaattctttgaaaagaaattgtCGTCTTTCCCAGCAGATGAAACTTGTAGCAACAAACCTATGGACCCATCTGTTGGGAGTCCTATGGAAGGAACTTCATCATGTGTGGATGCTGATGCAAAGAAATTGAGCTTGTCTCCAATAGTCTCCCCTATGGACAGGAAGTCAACTTCACCAGCCAAGGAAGTTTTATCGCTctctaaaattactaatttagaaGCAAATGATGAACAGCTGGAGGGGAAGACTGATTTATCTTGCAATAAGATTCCTTTAAGAAAAACGCTTGTTCTTGCTATTGCTGCTAGCGGAGAGGAAgtgagaaaaaggaagaataaagTTGTTAATGTTAATACTAGTCAAAAGAAGCAAAGGActgaaaaggggaaaaaaattgtcaatccTTCTTCTATAAAGTCCAAGTCCGGGAATAATAAAGTACACAAGAAGCAGAAGTCTATAACCCATAGCATTTCTGCGTCTGTATCAAAAGAGGATGTTGGAAACAAGAATTCTTATACCCAGCAGAAAGATGAGAAGTTCCCTCAGGTAATGAAAGTCACATCAAATGAACTTGATAAAACACAAAGTCTTGTGGACGAAACTTTGATGCATGAAGACAGTGCTATTATTGAGTCTCTGCAGGTTGATCGGGTTCTAGGGTGTCGAATTCAAGGCGAGAATGCAAATTCATTACGTCACTTATCCTTGAATGTTGTGGATGACTCACCTTCTGGTGATCTGGTAACATCAGAAAACCAGACCAGACTACTAGAGGATAATTCTGCTTGTGCTAATGATTTGGATGTTGAATCAACTGAAAATCTTGTCGACGATCATCAAAATGTTGTCAAGAGTTCTGATGAAGAAGGAATATTGAAAAACACTAATAGAGTGGAAAGGATTCATGTATACAGAAGATCAATGACAAAAGAATGTAAGAAAGGAAATCCTGCAGATTCATTGAGTAAAGCCACTGATGATTTGGGTTCCTGTGCCAGGGAAGGTAAAGATCAGGATGATTCTGCTGTATCTGCTGAACAGTTGGAAAAACCAAATGACAAGGTGGAGACAGAGGAGAGCATTAATGTTGCTTTAAGAAGCGAGGATAACAGTGACCTTccaaaaaattgtgaaatacaTGTCTCTcttgaaacaaaacaaaaagaaatgaatgcAGAGAAGGGAATGAGTGACAGTGTTGATAATAAAGCTCAAGATGCTAATGTAGTTGAATGTGCAGGTCCAAATGGAGAGAAAGTTCTCTatgaatttttagttaaatgggTAGGAAAGTCTCATATTCATAATAGTTGGATTTCTGAATCCCAGTTAAAAGTTCTTGCAAAGAGAAAACTAGAAAATTACAAGGCAAAGTATGGGATGgcgataattaatatttgtgaGGAGCATTGGAAGCAGCCTCAGCGGGTGCTTGCCCTTCGAACTTCCAAAGATGGAACATCTGAAGCATTTGTAAAATGGACTGGATTGCCTTATGATGAATGCACTTGGGAAAGTTTAGATGAATCAGTGCTTCAAAATTCTTCTCATTTGATTACAGTTTTTAATAAGCTTGAAACCCTCACTCTGGAAAGGGATTCATCAAAGGAAAATTCAACTAGAAAAAGCAATGACcatcaaaatgatatatttaatcttACAGAGCAACCTAAGGATCTAAAAGGTGGTTCTTTGTTTCCTCATCAGCTTGAGGCTCTGAACTGGTTGCGTAAATGCTGGTATAAGTCCAAAAATGTGATACTTGCTGATGAGATGGGGCTTGGGAAAACAGTATCTGCTTGTGCTTTTATTTCATCATTGTATTTTGAATTCAAAGTTTCACTTCCTTGCTTGGTTTTGGTACCGCTTTCTACAATGCCTAATTGGCTTGCTGAATTTGCACTATGGGCTCCAGATGTGAATGTTGTAGAATATCATGGCTGTGCTAAAGCAAGAGCCATAATTCGCCAGTATGAATGGCATGCAAATGATCCAAGTGGATTGAATAAGAAAACAGAAGCctataaatttaatgttcttttaaCTACATATGAAATGGTTCTTGCTGATTCTTCTCATTTGCGTGGAGTTCCTTGGGAAGTTCTTGTTGTTGATGAAGGCCATCGACTGAAGAATTCAGGAAGTAAGCTTTTCAGTTTGCTAAATACATTCTCCTTTCAACATCGTGTACTGTTGACAGGTACCCCTCTCCAGAACAACCTTGGCGAGATGTACAACTTGCTTAATTTCTTGCAGCCAGCTTCATTTCCTTCTCTATCCTCATTTGAGGAGAAATTTAATGATCTTACAACTGCAGAGAAAGTTGATGAATTGAAAAAACTTGTTGCTCCTCACATGCTTCGTAGACTTAAAAAGGATGCCATGCAAAATATCCCCCCTAAGACAGAAAGAATGGTTCCTGTTGAGTTGTCATCCATCCAAGCTGAATATTATCGTGCAATGCTTACAAAGAATTATCAAATGTTGCGGAATATAGGGAAAGGGGTTGCCCAACAATCTATGCTGAATATTGTGATGCAACTGAGGAAGGTCTGTAATCATCCATACCTCATACCTGGAACTGAGCCTGATTCTGGATCTGTTGAGTTCCTTCATGAAATGAGAATAAAGGCTTCAGCTAAGTTGACTCTTCTGCATTCTATGCTAAAGATTTTACATAGGGAAGGTCACAGAGttcttattttctcacaaatgaCCAAGCTTCTTGACATCTTGGAGGACTATTTGACTATAGAATTTGGGCCTAAAACATATGATAGAGTGGATGGATCTGTTTCTGTAGCTGATCGCCAGGCAGCAATTGCACGCTTTAACCAAGACAAAAGTCGATTTGTTTTCTTGTTATCCACTCGCTCTTGTGGACTTGGGATAAATTTGGCAACTGCTGACACTGTTATCATCTATGATTCTGATTTCAACCCCCATGCAGATATCCAAGCAATGAATCGAGCACACAGAATTGGACAATCAAATAGACTTTTGGTATACCGGCTTGTGGTTCGTGCTAGTGTTGAAGAGCGCATCTTGCAGCTTGCTAAGAAGAAATTGATGCTTGATCagctttttgtaaataagtcTGGATCTCAAAAAGAAGTAGAAGATATTTTAAAGTGGGGAACTGAGGAACTCTTCAACGATTCCCCTGGACTTAACGGGAAAGACATGAATGAAAATAACAATAGTAGCAAAGATGAGGCAGTAGCAGATGTAGAACATAAGCATCGGAAGAGGACTGGTGGTCTGGGAGATGTATACAAGGATAAGTGTACTGATAGCAGCAGCAAGATTCTGTGGGATGAAAATGCTATTTTAAAATTGCTTGATCGTTCAAACCTTCAAGATGGTTCAACAGATATTGCTGAAGGGGATTCTGAGAATGATATGCTGGGCTCAGTGAAGgcCCTTGAGTGGAATGACGAACCAACTGAAGAACATGTAGTGGGTGAATCTCCTCCCCAAGGGACTGATGATATGTGTACACAAAATTCTGAGAAAAAAGAGGATAATGCTGTGAATggcaatgaagaaaatgaatggGACAGACTACTGCGTGTGAGGTGGGAGAAATATCAAAGTGAGGAGGAAGCAGTTCTTGGTCGAGGGAAGCGGCAGAGGAAAGCTGTTTCTTATAGGGAAGTATATGCTCCACATCCAAGTGAAACAATGAGTGAGAGTGGTGGTGAAGAGGAAAAAGAGCCAGAACCAGAGCCTGAGCGTGAATATACACCAGCAGGACGGGCCCTCAAGGCAAAATATGCTAAACTCCGTGCTCGGCAAAAGGAACGACTTGCCTGGAGGAATCAGATTAAAGAATCACATCCTGCCGAGGGACATCCAGGTAATGAGTTACTCACACGTTCTCCAGCCATTGCCAAGGGTGGGGATCCAGGGGCTGGATCGATGCATTCAGTTAAAGAGGGGCCTTCTATCAACTTAGAGGACAGCAAGTACACACAACTTTCAGAAGCTCAGAATAGCAATACTGACTCCTTATCAAGGATCAATAAgctttcaaaacataaaatgagCAGTCACTTTAATGCTTCTGTCAGTAATCCAGGTCGTTCTCTCCCAGACATTTTTCTTCCATGTCATCCTATGGGGGGGCTGAGCATGACGAACTCTATACCCACCAACAATTTGTTGCCTGTGCTGGGACTTTGTGCTCCTAATGCTAACCAAATAGAATCATCAGAAAGTAATGTTTCGAAGTTGAATTGGAGACAAAATAGACATGGATCCAGACAAGAGTTTCCATTCAGCCTTGCCCCTTGCTCTGGGACATCCATGGATGCTGAGTTCAGAGGTAAGGAAGTGGCAGCAAATACCAAGCGGGCAGATGCATCAACTGAAAATTTACAACCAAGTTTCAAAAATAGCATCCCTGATAACAGTCTCCCATTTGTTCCAtttccACCCTCTCTGCAAGGAAAGGAATTCGATGCATTTGAAAATTCAGGTGCTAGATTCTCTCATTTTCAGGAGAAGATGACCTTGCCAAACCTGCCATTTGATGAAAGGTTGCTGACCAGATTTCCACTTACAACAAAGAGCATGCCAAATTCACATCTGGACCTCTTGCCCAATTTGTCTATAGGAGGAAGACTTGAATCTTTGAATGGATCTATGCAAGACCTTCCAACAATGCCAGCACTGCCTACTTTCAAAATACCCCCTGAAGATTTATTCAGATATAATCAGCAAGACAGGGATGTGCCCCCTACTTTGGGTTTGGGACAAAGGCCAACAACATTCTCATCTTTCCCAGAAAACCATAGGAAGGTGCTTGAAAACATAATGATGAGAACTGGATCTGGATCaagtaatttattgaaaaagaagtCAAAATTAGACGGGTGGTCTGAAGATGAACTTGATTCCCTCTGGATTGGTGTTCGTAGGCATGGAAGGGGTAATTGGGATGCTATGCTCAGAGATCCCAAGTTAAAGTTTTCAAAGTATAAAACATCTGAGGATTTATCAGTGAGGTGGGAAGAGGAACAAGTAAAGGTCTTTCAGGGGCCACCTTTTCCTGCACAAAGATCATCCAAGACTACGAAGTCTACCAAATCGGCACATTTTCCGATCTCTGATGGAATGATGGAAAGGGCCTTGCAGGGGAGCAAATTTCTTTTGCcaccaaaatttcaaaaccatCTGACTGACATGAAATTAGGCATAGGTGATTCTGCATCTGGTCTGCCACATTTTAGAACATTGGACCTACCTAGTTTGCAAAATGATCACTTTGCACCTCTTCCATCTTGGAGTTATGATAAAAACAGAGCAAAATTTCCTGAAGATGCTTCTGCTGAAACATCTGATAGACCAGGTACTTCTTCCGGTGTACTGACTGAAAGACCATTTCTGCTCAATTCTTTTGGAACCAGTACCTTGGGTTCTTTAGGTTTGAATTGCTCAGGAAGCATTGATGCACAGCAAAAGGAGGATGACCAAGGAAACTCCAAGCATGGAAAGTTGCCCATACTTCTGGATGGATCACCCAATGATATGCATGATAATTGCGTTAATGTAGGAAATGGTGAATCTACTAGCTCTGGATTGTTATCTAACCCCATTAGACCTGATCCTTTTCACTCAAAAAAAGAGGAAGGGGGTGGAAGCGGCACTTCAAAAGACAAGCTTCCCCACTGGTTACGAGAAGCTGTGGGCTCCCCAGCCAAACTTCCTGATCCTGAACTGCCACCGACAGTATCAGCCATTGCTCAATCAGTTCGCCTGTTATATGGGGAAGATAGGCCTACAATTCCTCCATTTGTGATTCCTGGACCGCCTCTCTCCCTACCAAAGGACCCCAGGTGTAGtgtcaagaagaaaaagaagagaagatcaCACAAGTTCAATCGGTGTCTTCCAGATTTTGCTGGAAACAGCAGGGACTTGCACAGCAGCCACCATGTTGATAATGGTGCTTCAAGCTCAATTCCTTTGGGCCCTCCATTGCCTCTACTTTCTCAGACAGGAACTCTTGGACCTCAGCACATTGAATCTGACCTTAACTTGCCTCCTCTAAATCTGAAAGTGGCAAACCTGTCACACTCTTCAAAAAAAGCAACTTCAGGACTGTCTCCATCTCCTGAAGTGCTTCAGTTGGTTGCATCCTGTGTTGCTCCTGGCTCCCATCTTCCATCAATCCCTGGTCCCTCAAACTTTCTTGAGAGCAAGCTTCCATTGCCAATGCCTGTTGGCAGAGCCAAATTCACAGACTCAGATGGTGCCTTCAGAAATAAGAATCCTAGGCAGGTTTCACCAAAAATTTGGTGTTCACCTCAAGAGCAAAATGTACAAGACCTTGATAGTGGAGATTCCAGCAAGACTCAGTCAGATCCCTCTCGGGTTGAACGGCCCGATGAAGTGGAAGTGTCATCCGAGGGAACTGTCTCAGACCATGCTGTGAGAGATCAGGAAACATAA 7002 0.3973 MLNRNWVLKRKRRKLHLGLDQSSGKEQSNSKEENSITSESSRSASAKRVLKTEVASDQISSKKKGNDGYYYECVICDVGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPSCFEGNDQLKPINHLDPISKRARTKIVTAKSKGQVNSLNLEKVSGLFGSKLISKKRSSSKGKSISTMGVKFFEKKLSSFPADETCSNKPMDPSVGSPMEGTSSCVDADAKKLSLSPIVSPMDRKSTSPAKEVLSLSKITNLEANDEQLEGKTDLSCNKIPLRKTLVLAIAASGEEVRKRKNKVVNVNTSQKKQRTEKGKKIVNPSSIKSKSGNNKVHKKQKSITHSISASVSKEDVGNKNSYTQQKDEKFPQVMKVTSNELDKTQSLVDETLMHEDSAIIESLQVDRVLGCRIQGENANSLRHLSLNVVDDSPSGDLVTSENQTRLLEDNSACANDLDVESTENLVDDHQNVVKSSDEEGILKNTNRVERIHVYRRSMTKECKKGNPADSLSKATDDLGSCAREGKDQDDSAVSAEQLEKPNDKVETEESINVALRSEDNSDLPKNCEIHVSLETKQKEMNAEKGMSDSVDNKAQDANVVECAGPNGEKVLYEFLVKWVGKSHIHNSWISESQLKVLAKRKLENYKAKYGMAIINICEEHWKQPQRVLALRTSKDGTSEAFVKWTGLPYDECTWESLDESVLQNSSHLITVFNKLETLTLERDSSKENSTRKSNDHQNDIFNLTEQPKDLKGGSLFPHQLEALNWLRKCWYKSKNVILADEMGLGKTVSACAFISSLYFEFKVSLPCLVLVPLSTMPNWLAEFALWAPDVNVVEYHGCAKARAIIRQYEWHANDPSGLNKKTEAYKFNVLLTTYEMVLADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNTFSFQHRVLLTGTPLQNNLGEMYNLLNFLQPASFPSLSSFEEKFNDLTTAEKVDELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQMLRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKILHREGHRVLIFSQMTKLLDILEDYLTIEFGPKTYDRVDGSVSVADRQAAIARFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILKWGTEELFNDSPGLNGKDMNENNNSSKDEAVADVEHKHRKRTGGLGDVYKDKCTDSSSKILWDENAILKLLDRSNLQDGSTDIAEGDSENDMLGSVKALEWNDEPTEEHVVGESPPQGTDDMCTQNSEKKEDNAVNGNEENEWDRLLRVRWEKYQSEEEAVLGRGKRQRKAVSYREVYAPHPSETMSESGGEEEKEPEPEPEREYTPAGRALKAKYAKLRARQKERLAWRNQIKESHPAEGHPGNELLTRSPAIAKGGDPGAGSMHSVKEGPSINLEDSKYTQLSEAQNSNTDSLSRINKLSKHKMSSHFNASVSNPGRSLPDIFLPCHPMGGLSMTNSIPTNNLLPVLGLCAPNANQIESSESNVSKLNWRQNRHGSRQEFPFSLAPCSGTSMDAEFRGKEVAANTKRADASTENLQPSFKNSIPDNSLPFVPFPPSLQGKEFDAFENSGARFSHFQEKMTLPNLPFDERLLTRFPLTTKSMPNSHLDLLPNLSIGGRLESLNGSMQDLPTMPALPTFKIPPEDLFRYNQQDRDVPPTLGLGQRPTTFSSFPENHRKVLENIMMRTGSGSSNLLKKKSKLDGWSEDELDSLWIGVRRHGRGNWDAMLRDPKLKFSKYKTSEDLSVRWEEEQVKVFQGPPFPAQRSSKTTKSTKSAHFPISDGMMERALQGSKFLLPPKFQNHLTDMKLGIGDSASGLPHFRTLDLPSLQNDHFAPLPSWSYDKNRAKFPEDASAETSDRPGTSSGVLTERPFLLNSFGTSTLGSLGLNCSGSIDAQQKEDDQGNSKHGKLPILLDGSPNDMHDNCVNVGNGESTSSGLLSNPIRPDPFHSKKEEGGGSGTSKDKLPHWLREAVGSPAKLPDPELPPTVSAIAQSVRLLYGEDRPTIPPFVIPGPPLSLPKDPRCSVKKKKKRRSHKFNRCLPDFAGNSRDLHSSHHVDNGASSSIPLGPPLPLLSQTGTLGPQHIESDLNLPPLNLKVANLSHSSKKATSGLSPSPEVLQLVASCVAPGSHLPSIPGPSNFLESKLPLPMPVGRAKFTDSDGAFRNKNPRQVSPKIWCSPQEQNVQDLDSGDSSKTQSDPSRVERPDEVEVSSEGTVSDHAVRDQET 2333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2106 2333 CDD PHD2_CHD_II 73 114 - -
Ssu5g2106 2333 CDD SANT_TRF 1809 1853 - -
Ssu5g2106 2333 SMART chromo_7 652 709 IPR000953 -
Ssu5g2106 2333 SMART chromo_7 394 642 IPR000953 -
Ssu5g2106 2333 MobiDBLite consensus disorder prediction 1236 1273 - -
Ssu5g2106 2333 SMART ultradead3 743 947 IPR014001 -
Ssu5g2106 2333 ProSitePatterns Zinc finger PHD-type signature. 73 114 IPR019786 -
Ssu5g2106 2333 SMART helicmild6 1092 1177 IPR001650 -
Ssu5g2106 2333 Gene3D - 1781 1882 - -
Ssu5g2106 2333 MobiDBLite consensus disorder prediction 2270 2303 - -
Ssu5g2106 2333 Pfam Chromo (CHRromatin Organisation MOdifier) domain 655 706 IPR023780 -
Ssu5g2106 2333 MobiDBLite consensus disorder prediction 2259 2333 - -
Ssu5g2106 2333 SUPERFAMILY Chromo domain-like 600 642 IPR016197 -
Ssu5g2106 2333 Pfam SNF2-related domain 765 1040 IPR000330 GO:0005524|GO:0140658
Ssu5g2106 2333 Gene3D - 564 641 - -
Ssu5g2106 2333 ProSiteProfiles Chromo and chromo shadow domain profile. 654 716 IPR000953 -
Ssu5g2106 2333 MobiDBLite consensus disorder prediction 1867 1882 - -
Ssu5g2106 2333 MobiDBLite consensus disorder prediction 298 358 - -
Ssu5g2106 2333 PANTHER PROTEIN CHROMATIN REMODELING 4 8 2327 - -
Ssu5g2106 2333 MobiDBLite consensus disorder prediction 2135 2185 - -
Ssu5g2106 2333 Pfam Helicase conserved C-terminal domain 1066 1177 IPR001650 -
Ssu5g2106 2333 MobiDBLite consensus disorder prediction 18 49 - -
Ssu5g2106 2333 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 48 125 IPR013083 -
Ssu5g2106 2333 MobiDBLite consensus disorder prediction 2052 2072 - -
Ssu5g2106 2333 MobiDBLite consensus disorder prediction 1455 1497 - -
Ssu5g2106 2333 MobiDBLite consensus disorder prediction 21 47 - -
Ssu5g2106 2333 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 8 2327 - -
Ssu5g2106 2333 MobiDBLite consensus disorder prediction 2029 2047 - -
Ssu5g2106 2333 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1066 1225 IPR001650 -
Ssu5g2106 2333 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 759 936 IPR014001 -
Ssu5g2106 2333 MobiDBLite consensus disorder prediction 493 540 - -
Ssu5g2106 2333 MobiDBLite consensus disorder prediction 335 358 - -
Ssu5g2106 2333 Gene3D - 981 1208 IPR027417 -
Ssu5g2106 2333 SUPERFAMILY Chromo domain-like 646 692 IPR016197 -
Ssu5g2106 2333 MobiDBLite consensus disorder prediction 1349 1364 - -
Ssu5g2106 2333 SUPERFAMILY FYVE/PHD zinc finger 70 117 IPR011011 -
Ssu5g2106 2333 MobiDBLite consensus disorder prediction 511 540 - -
Ssu5g2106 2333 MobiDBLite consensus disorder prediction 1863 1882 - -
Ssu5g2106 2333 SMART PHD_3 72 115 IPR001965 -
Ssu5g2106 2333 CDD SF2_C_SNF 1061 1188 - -
Ssu5g2106 2333 SUPERFAMILY Homeodomain-like 1808 1854 IPR009057 -
Ssu5g2106 2333 MobiDBLite consensus disorder prediction 1383 1399 - -
Ssu5g2106 2333 MobiDBLite consensus disorder prediction 2000 2072 - -
Ssu5g2106 2333 Gene3D - 738 980 IPR038718 -
Ssu5g2106 2333 Pfam CHD subfamily II, DUF1087 1357 1401 IPR009463 -
Ssu5g2106 2333 ProSiteProfiles Zinc finger PHD-type profile. 70 117 IPR019787 -
Ssu5g2106 2333 SMART DUF1087_2 1342 1407 IPR009463 -
Ssu5g2106 2333 CDD CD2_tandem 653 706 - -
Ssu5g2106 2333 CDD CD1_tandem 597 638 - -
Ssu5g2106 2333 Gene3D - 656 706 - -
Ssu5g2106 2333 Pfam PHD-finger 73 114 IPR019787 -
Ssu5g2106 2333 MobiDBLite consensus disorder prediction 1383 1435 - -
Ssu5g2106 2333 MobiDBLite consensus disorder prediction 195 214 - -
Ssu5g2106 2333 ProSiteProfiles Chromo and chromo shadow domain profile. 572 640 IPR000953 -
Ssu5g2106 2333 MobiDBLite consensus disorder prediction 2304 2333 - -
Ssu5g2106 2333 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 717 971 IPR027417 -
Ssu5g2106 2333 MobiDBLite consensus disorder prediction 1332 1364 - -
Ssu5g2106 2333 MobiDBLite consensus disorder prediction 1247 1273 - -
Ssu5g2106 2333 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 973 1234 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2106 Ssu-Chr5 61189072 61209840 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g2106 727 1220 RAD5 or RAD16-like Gene Family AT1G02670 26.541 4.66e-35 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Ssu5g2106 SNF2_N 4.1e-58 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2106 - - gmx:100793933 4086.18