Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2090 ATGTCAATGGCTGCGCCTCTCACAATTGTAAGAATTCCCACTTTCCACAACCTACGATCCCACTCTCCCAAACGCCCTCTCAACAAACACTTCACCGCACCCTCTTCCTTGTCCCTCCTCAGTTTCGCAAAGATGGAAGGAAGTGAAATCACCGAGCAAGTGGCTGAGAAAGCAGGGGAGGATTTGAGAGcgaagaagaaaatttttgttgcTGGAGCCACAGGTAGCACTGGGAAGAGAATCGTTGAGCAGTTACTGGCAAAGGGTTTTGCTGTTAAGGCTGGGGTTAGAGACTTGGACAAGGCCAGGACCACCCTTTCCTCTACCAACCCATCTCTTCAAATTGTGAAAGCTGATGTCACAGAGGGTTCTGATAAGCTAGCTCAAGCCATTGGTGATGATTCAGAGGCAGTAGTGTGTGCCACAGGCTTTCGCCCAGGGTGGGATTTGCTTGCTCCGTGGAAGGTTGACAATTTTGGCACGGTAAACCTTGTTGAAGCATGCAGGAAACGTAATGTTAACAGATTCATTCTTATCAGTTCCATTTTAGTTAATGGAGCAGCAATGGGACAGCTACTCAATCCGGCTTACATCTTTCTTAATGTTTTTGGACTCACCTTAGTAGCAAAACTACAGGCAGAGAAATATATCAGGAAATCCGGTATAAACTACACAATAATAAGACCCGGCGGGTTGAGAAATGATCCTCCTACTGGAAATGTTGTTATGAAGCCCGAGGACACCCTTTATGAAGGTTCCATATCCAGAGATCAAGTTGCTGAAGTGGCTGTGGAGGCATTGGCTTATCCTGAGGCATCTTATAAAGTTGTGGAAATAGTGTCTCGCCCTGATGCTCCTAAGCGCTCATACCATGACCTTTTTGGTTCCATAAAGCAACGATAA 903 0.4529 MSMAAPLTIVRIPTFHNLRSHSPKRPLNKHFTAPSSLSLLSFAKMEGSEITEQVAEKAGEDLRAKKKIFVAGATGSTGKRIVEQLLAKGFAVKAGVRDLDKARTTLSSTNPSLQIVKADVTEGSDKLAQAIGDDSEAVVCATGFRPGWDLLAPWKVDNFGTVNLVEACRKRNVNRFILISSILVNGAAMGQLLNPAYIFLNVFGLTLVAKLQAEKYIRKSGINYTIIRPGGLRNDPPTGNVVMKPEDTLYEGSISRDQVAEVAVEALAYPEASYKVVEIVSRPDAPKRSYHDLFGSIKQR 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2090 300 Gene3D - 50 288 - -
Ssu5g2090 300 CDD SDR_a5 67 282 - -
Ssu5g2090 300 Pfam NAD(P)H-binding 72 269 IPR016040 -
Ssu5g2090 300 PANTHER FLAVIN REDUCTASE-RELATED 45 300 - -
Ssu5g2090 300 PANTHER - 45 300 - -
Ssu5g2090 300 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 66 281 IPR036291 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g2090 65 197 Monolignol Biosynthesis Gene Families AT2G33590 32.394 4.09e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2090 - - gmx:100792523 508.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g2090 5 60396344 60398779 Ssu5g2090 5 60396344 60398779 ECH