Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2072 ATGGAAGTGGTGACACCTAATCCCAATGGGAGTCCCTCTATTGATCCTTTCGATTTCAACCGCGCAAGGATTTTGCCTTATCTGAGTGCCCCTTCTTCGCCTAAGTGCTTCGGGGAATATTATTACCTAAGCACTCTCGCAAGCACACCCAAAGAGAAGAAGGAGGGACAAGAGCGTTTCTTCATCGGGCTCGAGTTGGAGAGTCACACGCTTACTCTCTCCTTACAGAGTGTATCACCACAGGTGGGCCAAGGCAAAAGCCACCTTTTTCGCGAAGTAGGACCACCGCAAGAAGAGGTCATCGACATTGAGTGGTTCTTCCTCATCTCCATGACCCAGTCCTTCGCCAACGGCGGTAGGCTACCTGGACACCCCTGTGAGAAAGCGCACTAG 393 0.5165 MEVVTPNPNGSPSIDPFDFNRARILPYLSAPSSPKCFGEYYYLSTLASTPKEKKEGQERFFIGLELESHTLTLSLQSVSPQVGQGKSHLFREVGPPQEEVIDIEWFFLISMTQSFANGGRLPGHPCEKAH 130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2072 Ssu-Chr5 59935653 59936348 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g2072 98 123 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G46760 76.923 1.19e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2072 K13422 - gmx:100526861 63.1586