Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2037 ATGAAGGCCTATGCTAACTTGCAGAAAAGAAAGTCTACCTTGATTAGTGATGGACATCCTTCTGCATTCAAGAAGAGGAGTTCAAGAATGGGAAGCTATGTGGACTCTCTTGAAAGAAAGCAGCCACAGGATAACTTTACTagagaagaaaattataatGAGGATGAGGATAACAATGATGTTGGCGACAATGCGGATGCAGAAAAAGCAGGAGATGACGGTGCAGTGGATGACCATCAAGAGGACGCAGAGTACTTACCAGGGGATGATGGTCCAACTGCTACAGAGGAGCAACATCACAAAGTTCTGCTCACAAAAGATGCAGACGAAAAGAATAAACCTTCTACACGACATTTCATCCATGGATATCACTTGATCCAAGGACAGATGAACCATGGAATGGAAGACTATATTTTTGCTCAACACAGGAATCTCAATGGTTATGACTTAGGGTTGTATGCAATATTTGATGGTCACTCCGGTCATGAAGTTGCAAAATACTTGCAAAGCCATCTATTCAAAAATATACTGAGTGAGCCTGATTTCTGGGAAAATTCAGGGCATGCCGTTAAGAAAGCATGTAAAGCTACAGACGATGAGATTTTGGAAAACATAGCTGATTCACGTAGAGGATCAACAGCTGTTGCAGAAATACTAATTAATGGACTAAAGCTACCGGTAGCCAATGTTGGTGATTCTCGAGCAATATCATGCAAGAATGGTCGAGCAAAACCACTTACTGTGGATCATGAACCAGAGAAGGAAAAAGATCTTATTGAGAGAAGAGGGGGTTTTGTGTCTAAGAAACCTGgGAATATTCCAAGAGTGGATGGCCAATTAGCAATGACACGAGCATTTGGAGATGGAAAACTGAAGGAGCACATTACGGCAGAACAAGATGTGACACTTCAGAAGATTGATGAAGACACCCAATTCATCATTTTGGCAAGTGATGGTCTGTGGAAGGTACGAGGATATTGCATGTATCTTATAATTACTGATGAGGACACCTTGGCTGAAATAGAGCATGCATAA 1035 0.4087 MKAYANLQKRKSTLISDGHPSAFKKRSSRMGSYVDSLERKQPQDNFTREENYNEDEDNNDVGDNADAEKAGDDGAVDDHQEDAEYLPGDDGPTATEEQHHKVLLTKDADEKNKPSTRHFIHGYHLIQGQMNHGMEDYIFAQHRNLNGYDLGLYAIFDGHSGHEVAKYLQSHLFKNILSEPDFWENSGHAVKKACKATDDEILENIADSRRGSTAVAEILINGLKLPVANVGDSRAISCKNGRAKPLTVDHEPEKEKDLIERRGGFVSKKPGNIPRVDGQLAMTRAFGDGKLKEHITAEQDVTLQKIDEDTQFIILASDGLWKVRGYCMYLIITDEDTLAEIEHA 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2037 344 SUPERFAMILY PP2C-like 117 324 IPR036457 -
Ssu5g2037 344 MobiDBLite consensus disorder prediction 63 86 - -
Ssu5g2037 344 Pfam Protein phosphatase 2C 132 323 IPR001932 -
Ssu5g2037 344 PANTHER ALPHABET, ISOFORM E-RELATED 85 331 - -
Ssu5g2037 344 CDD PP2Cc 119 323 IPR001932 -
Ssu5g2037 344 MobiDBLite consensus disorder prediction 1 95 - -
Ssu5g2037 344 PANTHER PROTEIN PHOSPHATASE 2C 28-RELATED 85 331 - -
Ssu5g2037 344 Gene3D - 113 338 IPR036457 -
Ssu5g2037 344 ProSiteProfiles PPM-type phosphatase domain profile. 120 344 IPR001932 -
Ssu5g2037 344 SMART PP2C_4 110 341 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2037 Ssu-Chr5 58795712 58800366 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g2037 117 326 PP2C-type Phosphatase Gene Family AT2G34740 63.507 8.08e-97 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2037 - - gmx:100814772 547.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g2037 5 58795712 58800366 Ssu5g2037 5 58795712 58800366 ECH