Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2031 ATGTCCCCCTGTTCTGGTGTCAGTGCACATGGAACTCTAAGACGTGAGTCGTGCCTCGTTTTGTCGGTTTGTAAATTTTGTGGAAGTCTGGAAGAAAGCAAAATACTTGAGCTTGTCTGgagtgaatattttacaaaaatggcAAATGTTGATTACATGGTTCAATGGGATGGACCAGGAACAATTCCAAGGCCAGGTAGAGTTTCTTGTTGGGAGATAGAACCTTTTGTAGCTTCTACTTTGAATGCCACTCAATCAGCAGTGAAGGGCAAAAGGTCTAGGCCTGCTGATGTCTCATCTTCTGGCTGGAGACTTGTCCACGTGCCAGGGAGTCCTGCAACATGGTGA 348 0.4339 MSPCSGVSAHGTLRRESCLVLSVCKFCGSLEESKILELVWSEYFTKMANVDYMVQWDGPGTIPRPGRVSCWEIEPFVASTLNATQSAVKGKRSRPADVSSSGWRLVHVPGSPATW 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2031 115 Gene3D - 51 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2031 Ssu-Chr5 58516167 58518554 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g2031 54 95 B3 DNA Binding Superfamily AT2G46530 56.818 3.28e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2031 K14486 - gmx:100795763 86.6557