Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2007 ATGTCTTATGAAGAACATAAGCGTCTTAGGCGTTTGACATCGTCTTCAATCAATGGCTTGGAAGCGTTGTCCCTGTACTTGACATATATTGAAGAAAATGTGAAGAGTTCACTGGAGAAGTGGGTCAACATGGGACAAATTGAGTTTTTAACTGAGCTCCGAAAGCTTGCATTTAAAGTCACTATGCATATTTTCCTTGGCTCTGAGTGTCGTGACTATGTTATGGAAGCTTTGGAAAAGGAATACATTACACTTAATTTTGGAATTAGAGCTATGCGAATTAATCTTCCTGGATTTGCGTTCCACAAAGCCTTCAAGGCTAGGAAAAATCTAGTGGCGAAATTTCAACTTATTGTGAATGAACGAAGGAAGCAAAGGAAtgaaaatttatccaaacaagccaAAGACAAGATGGATGCTCGAATTGGAGTTGAAGATGAAAATGGAATTAAATTGAGTGATGAAGAAATCATTGATGTTATGATAATGTACTTGAATGCGGGTCATGAAGTCTTCAGGACATGTTACCATGTGGACTATCTTGTTCCTACAAAAGCACCCAGAATACTTCCAAAAGGCTAA 582 0.366 MSYEEHKRLRRLTSSSINGLEALSLYLTYIEENVKSSLEKWVNMGQIEFLTELRKLAFKVTMHIFLGSECRDYVMEALEKEYITLNFGIRAMRINLPGFAFHKAFKARKNLVAKFQLIVNERRKQRNENLSKQAKDKMDARIGVEDENGIKLSDEEIIDVMIMYLNAGHEVFRTCYHVDYLVPTKAPRILPKG 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2007 193 PANTHER CYTOCHROME P450 26 1 171 - -
Ssu5g2007 193 Pfam Cytochrome P450 2 170 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2007 193 Gene3D Cytochrome P450 1 175 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2007 193 PANTHER ENT-KAURENOIC ACID OXIDASE 2 1 171 - -
Ssu5g2007 193 SUPERFAMILY Cytochrome P450 3 170 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2007 Ssu-Chr5 57918197 57926054 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g2007 1 170 Cytochrome P450 AT2G32440 63.529 1.91e-72 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2007 K04123 - gmx:100781238 253.062