Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g1982 ATGAAGGACATGTTGAATTTGTTGCAACGGTTGAAGCCAGACATGCTAATGGTGTTTGTGCAGGTTGCACTTGCTGCGGTCAATGTGATCTACAAGCTAGCCATAAACGATGGAATGAGTATGAGGGTAGCTACTGCCTATCGTCTCATTTTTGCATCGGCTTTCACAGTCCCCCTGGCTCTTATCTTTGATAGGTCAATTATTGTCTTGCAGTCTTTTATACTAATGCACCTATTATTTAACATAGCATTGGTCGGGGGaaaatggagagaaaagaagaaatttttataa 291 0.3849 MKDMLNLLQRLKPDMLMVFVQVALAAVNVIYKLAINDGMSMRVATAYRLIFASAFTVPLALIFDRSIIVLQSFILMHLLFNIALVGGKWREKKKFL 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g1982 96 PANTHER WAT1-RELATED PROTEIN 7 87 IPR030184 GO:0016021|GO:0022857
Ssu5g1982 96 PANTHER MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN, PUTATIVE-RELATED 7 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g1982 Ssu-Chr5 57287321 57287611 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g1982 1 65 Nodulin-like Gene Family AT1G68170 41.538 2.61e-12 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g1982 - - gsj:114424758 107.071