Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g1957 ATGGATTTGAACATGAAAGCTTTACTGTCTCCTCATGATGCTGAACTTAGGAAAGATGACAACTTTGGTGATACTACATTATGCTTGAATGGCATTGGCGTCAGAGAAACAAATAAGACTAGTTATAGATGTACTGAGAGAAATCTTGGGATGAAATTTTCCAATGCTTCTGATGATGGCTGCAGATTGGTGCTGGGATTGGGCCCAACCCCAATGGCATATGGTGATGACTACAACAATTTGGGGTTTAATATGAAGAAAAAGTCAACCAACCTTTTTCCTCAGCATGTGCCATCTGAATGTGAATCAATCCTTCAACTTGGCCTTTCGGGTGTGACAAATGAGGCATCAAGTGTGCTCGACTGCTCAGGTTCAACTGAAACTGATGTGAATATGTCATGTTTTTCAAGCCAAACATCTGcagaaaattattattcaagGATTCCTGTTGTTGATGAAGGTTCTACCTCAGCAAAGAAATCAGGTGGCTATATGCCATCACTTCTTTTAGCTCCAAGAATGGATAATGCTGAAAGTTCGGTGCAGACACAAGAATTAATTGTTGGGACTAAACCTCAACTGTGCCCAGAACCGTCCAATGCTGTAAATTACTCAATGGGTACTGCATCTGCTGGGCCCCAGGCTACAGGGATGACTTCAGAGAACCGAACAAGCAATCCTAAGAGATGTAGATTTTTTGACTGTACAAAAGGAGCTCGAGGTGCTTCGGGGCTTTGTATTGGACATGGTGGTGGACAGAGATGTCAGAAACCAGGATGCAACAAAGGTGCCGAGAGCCGTACTGCTTATTGTAAGGCCCATGGTGGAGGGAAGAGGTGCCAATACTTAGGATGTACTAAAAGTGCTGAGGGGAAGACAGATTATTGCATTGCACATGGCGGTGGTAGGCGATGTGGGCATCCAAGTGGGTGCGCAAAAGCTGCACGGGGTAAGTCAGGACTTTGCATTAGACATGGAGGGGGTAAGAGGTGTAGAATAGAAGGTTGTGCCCGGAGTGCTGAAGGGCAGGCTGGGTTGTGCATCTCTCATGGGGGTGGACGCCGTTGTCAGTTCCAAGGATGTACAAAGGGTGCACAAGGGAGCACTCTGTTTTGCAAGGCACATGGTGGTGGGAAGCGTTGCTCATTTGCAGGGTGTACCAAAGGTGCTGAAGGAAGCACCCCACTGTGTAAGGCGCATGGTGGGGGGAAGCGCTGCCTTTTCAATGGAGGTGGCATTTGCCCGAAAAGTGTACATGGAGGCACTAACTTCTGTGTTGCTCATGGTGGTGGAAAGAGGTGTGCTGTTGCAGGTTGCACCAAGAGTGCACGTGGCCGTACTGACTGTTGTGTTAGGCATGGTGGGGGTAAGCGATGCAAGGTTGAAGGCTGTGGGAAGAGTGCTCAAGGGAGTACAGATTTCTGCAAGGCCCATGGTGGAGGAAAGCGATGTAATTGGGGAGATGGAAAGTGTGAGAAATTTGCAAGGGGAAGGAGTGGGCTCTGTGCTGCTCACAGCAGCTTGGTGCAAGAGCGGGAAATGAACAAGGGCAGTCTGATTGCACCGGGACTTTTCCGCGGTCTTGTACCTGCTGCTTCCACTGCCTGTAGCAGTTTTGAGAACAACTCTTCCTCAGGCGGCAGTGTTGTGTCTGAATCCTATGATTCCATGGAAACTCCAACAATAAGACAGCACCTTATACCCAAGGAGGTGTTAGTTCCGCTCTCAATGAAATCACCATCTTATTCAAACTTCTTGACTGCCAATAAGCCAGACCAAGACAGAAACTGCCAAAGCTCTGCCGCTGGCTGCAGCGGTGCTCAGAAAGGCCTCGAGTTTAATCTACCAGAGGGCAGGGTCCATGGCGGTGACCTCATGTTGTATTTTGGAGGGAAACTCAAAAATGCACTTGATGGTATCTGA 1923 0.4779 MDLNMKALLSPHDAELRKDDNFGDTTLCLNGIGVRETNKTSYRCTERNLGMKFSNASDDGCRLVLGLGPTPMAYGDDYNNLGFNMKKKSTNLFPQHVPSECESILQLGLSGVTNEASSVLDCSGSTETDVNMSCFSSQTSAENYYSRIPVVDEGSTSAKKSGGYMPSLLLAPRMDNAESSVQTQELIVGTKPQLCPEPSNAVNYSMGTASAGPQATGMTSENRTSNPKRCRFFDCTKGARGASGLCIGHGGGQRCQKPGCNKGAESRTAYCKAHGGGKRCQYLGCTKSAEGKTDYCIAHGGGRRCGHPSGCAKAARGKSGLCIRHGGGKRCRIEGCARSAEGQAGLCISHGGGRRCQFQGCTKGAQGSTLFCKAHGGGKRCSFAGCTKGAEGSTPLCKAHGGGKRCLFNGGGICPKSVHGGTNFCVAHGGGKRCAVAGCTKSARGRTDCCVRHGGGKRCKVEGCGKSAQGSTDFCKAHGGGKRCNWGDGKCEKFARGRSGLCAAHSSLVQEREMNKGSLIAPGLFRGLVPAASTACSSFENNSSSGGSVVSESYDSMETPTIRQHLIPKEVLVPLSMKSPSYSNFLTANKPDQDRNCQSSAAGCSGAQKGLEFNLPEGRVHGGDLMLYFGGKLKNALDGI 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g1957 640 PANTHER BNAC02G43180D PROTEIN 21 636 - -
Ssu5g1957 640 PANTHER EMB|CAB89363.1 21 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g1957 Ssu-Chr5 56861151 56863073 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g1957 354 505 WRKY Transcription Factor Family AT4G12020 57.895 5.67e-47 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g1957 - - gmx:100806841 1226.46