Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g1935 ATGGCAAACCCTAAAACCAAGAGTTCCCATTCGATGGGTGGCGAGGACGATCCCGAGTCCAGCGAATCGCGGTGGGTTTTCCAGGAGGACGAGGATCCCTCCGAGATCGAGGACTTCGACGCCGCCGATTTGCGCCACCAGCCTATGTTCGATTCCGATGACGAGGATAATGCCGAGCACAGACTCGTTCGCACTGGTCCACGAATTGATTCCTTCGATGTCGAAGCTCTCGAGGTTCCCGGTGCTCAGAGAAATGACTGCGAGGAAGTTAGCGTGGGAAAGGGAATTGTGTTGGCTTGTCAAACTCTTGGTGTTGTCTTTGGTGATGTTGGGACAAGTCCTTTGTATACCTTCAGTGTTATGTTTAGGAAGGCACCTATTAATGGAAATGAAGACATTCTTGGAGCATTATCACTTGTCTTGTACACTTTAATCTTGATTCCATTACTGAAGTATGTCCTTGTTGTTCTGTGGGCCAATGATGACGGGGAAGGTGGTACATTTGCATTGTACTCCTTGATTTGTCGAAATGCTAAGGTGAGTCTTCTTCCCAATCGGTTGCCATCAGATGCCCGAATATCAGGCTTTAGGCTAAAGGTGCCATCTGCCGAGCTTGAAAGGTCTTTAAAAATCAAGGAAAGGCTAGAGACTTCGCTGACTCTGAAGAAGACTCTACTATTATTAGTTCTTGCTGGTACTTCCATGGTGATAGCTAACGGGGTTGTTACACCAGCAATGTCAGTACTATCATCCGTTAATGGTTTGAAAGTTGGGGTAGATGCAATTAAGCAAGATGAAGTGGTGATGATTTCTGTTGCCTGCCTTGTCATTTTGTTCAGTGTGCAGAAGTATGGAACAAGTAAAGTGGGGCTTGCCATAGGACCTGCTTTGTTTATATGGTTTTGTTCTCTTGCGGGCATTGGCATATACAACCTTGTCAAATATGACAGCAGTGTCTTGAGGGCATTTAATCCtattcacatatattatttctttgcaAGGAATTCAACTAAAGCATGGTATTCTCTTGGGGGCTGTCTTCTGTGTGCAACTGTTTTGCTTGGCTTCCTACGTCCTTGTTGTGTGGTGGCTGCACTTGCCACTTGGTTTGCTGCGACCATCTCTCTGTTTGGCGATTGCGCTTGCTTGTTCCTTTGTCGTCTTTCAGGCATTGCTGAGCTGGGGGTGATGATGATGACTACTATTTTAGTAACTCTTGTTATGCTTCTTATATGGCAGATACACATCATTGTAGTGCTGAGTTTCGCAGTAGTCTTCCTGGGATTggagttgactttcttttcatCAGTTTTGTGGAGTGTAACAGATGGAAGTTGGATTATATTGGTCTTTGCtgtaataatgttttttataatgtttgtaTGGAATTATGGGAGCAAGCTCAAGTATGAAACTGAAGTAAAGCAAAAGCTGTCAATGGATTTAATGCGGGAGTTAGGCTGCAATCTTGGGACAATACGAGCTCCTGGGATTGGTTTGCTCTATAATGAGTTGGTCAAAGGAATTCCAGGCATTTTTGGGCATTTTCTAACCACACTTCCAGCAGTACACTCTATGATTATATTTGTGAGTATTAAGTATGTTCCAGTTCCTATGGTGCCTCAAAGTGAAAGGTTCCTTTTTCGGCGAGTTTGCCAGAGAAGCTATCATATATTTCGTTGTATTGCCAGGTAA 1695 0.4289 MANPKTKSSHSMGGEDDPESSESRWVFQEDEDPSEIEDFDAADLRHQPMFDSDDEDNAEHRLVRTGPRIDSFDVEALEVPGAQRNDCEEVSVGKGIVLACQTLGVVFGDVGTSPLYTFSVMFRKAPINGNEDILGALSLVLYTLILIPLLKYVLVVLWANDDGEGGTFALYSLICRNAKVSLLPNRLPSDARISGFRLKVPSAELERSLKIKERLETSLTLKKTLLLLVLAGTSMVIANGVVTPAMSVLSSVNGLKVGVDAIKQDEVVMISVACLVILFSVQKYGTSKVGLAIGPALFIWFCSLAGIGIYNLVKYDSSVLRAFNPIHIYYFFARNSTKAWYSLGGCLLCATVLLGFLRPCCVVAALATWFAATISLFGDCACLFLCRLSGIAELGVMMMTTILVTLVMLLIWQIHIIVVLSFAVVFLGLELTFFSSVLWSVTDGSWIILVFAVIMFFIMFVWNYGSKLKYETEVKQKLSMDLMRELGCNLGTIRAPGIGLLYNELVKGIPGIFGHFLTTLPAVHSMIIFVSIKYVPVPMVPQSERFLFRRVCQRSYHIFRCIAR 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g1935 564 MobiDBLite consensus disorder prediction 39 58 - -
Ssu5g1935 564 MobiDBLite consensus disorder prediction 1 58 - -
Ssu5g1935 564 PANTHER POTASSIUM TRANSPORTER 389 564 - -
Ssu5g1935 564 PANTHER POTASSIUM TRANSPORTER 4 351 - -
Ssu5g1935 564 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 389 564 IPR003855 GO:0015079|GO:0016020|GO:0071805
Ssu5g1935 564 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 4 351 IPR003855 GO:0015079|GO:0016020|GO:0071805
Ssu5g1935 564 Pfam K+ potassium transporter 100 351 IPR003855 GO:0015079|GO:0016020|GO:0071805
Ssu5g1935 564 Pfam K+ potassium transporter 387 561 IPR003855 GO:0015079|GO:0016020|GO:0071805
Ssu5g1935 564 MobiDBLite consensus disorder prediction 10 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g1935 Ssu-Chr5 56515705 56525451 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g1935 390 564 Inorganic Solute Cotransporters AT5G09400 83.429 1.84e-97 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g1935 - - gmx:100803841 610.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g1935 5 56515705 56525451 Ssu1g0188 1 4933424 4942946 PCT