Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g1934 ATGGAGAGCCTAGAGAAGTTTATACGTCGTGAGGCTCAGGAGAGGTCGCTTGAGAGTGATGGGGATGATGATACTGATTCTGAGGATGAGTACTCTGGTTCTAGGGTTCTTATAGGTCCCAATGGAAGTGTTTATTCACTTGGCGTTCCTCTTCTGGCTGATTTTATTGATACAATCATACCCAATTTTGAAGCAAGCACATCTGAGGAGGCAAGCACAGAATCTCCTAAGCCCCCAGTGGTTGATGCTGAGCAGAGTCTTGAAAGAGAGTTATCTTTTATACGCAAGGCTAAAGAATCTGGAGTTGTTTATCTTCTTGGTCACGGGGATATAAGGGCAAGAAAAGACTCATGGTTTATCAAGAagctaattataaactatttttattcctGTCTGAGAAAGAACTGCACAAGGGGGATCACAAATTTAAGTGTACCCCATTCGCATCTGATGCAGGTTGGCATGACCTACATGGTCTGA 480 0.4188 MESLEKFIRREAQERSLESDGDDDTDSEDEYSGSRVLIGPNGSVYSLGVPLLADFIDTIIPNFEASTSEEASTESPKPPVVDAEQSLERELSFIRKAKESGVVYLLGHGDIRARKDSWFIKKLIINYFYSCLRKNCTRGITNLSVPHSHLMQVGMTYMV 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g1934 159 MobiDBLite consensus disorder prediction 1 35 - -
Ssu5g1934 159 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 158 IPR003855 GO:0015079|GO:0016020|GO:0071805
Ssu5g1934 159 MobiDBLite consensus disorder prediction 1 17 - -
Ssu5g1934 159 PANTHER POTASSIUM TRANSPORTER 1 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g1934 Ssu-Chr5 56514950 56515429 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g1934 1 159 Inorganic Solute Cotransporters AT5G09400 72.561 1.02e-76 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g1934 - - gmx:100803841 275.404