Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g1818 ATGTCAGCGTACCGATGGAAGAGCTTTGACGAGAACGAGGATCGCCCCGCCAAGCCTCGCCGTTTTGGCGTCACCGAGATGCGAAGCCCCCACTACACGCTCTTCTCCCACAACCTTCTTCAGGACATTTTCGAATCTATGGGAGATTATGTTGATGGGTTGAAGTTTTCTGGGGGTTCTCACAGCTTGATGCCAAAGGCTACTATCAAGCAAGTGATTGACATGGCCCATCAGCATGACGTTTATGTTAGTACGGGTGATTGGGCCGAGCACATGATTCGCAAAGGTCCATCAGGTTTCAAAGAATATGTAGAGGAATGCAAGCAGTTGGGGTTTGACACAATTGAGCTCAATGTGGGCTCACTTGGGATTCCTGAAGAAACCCTTTTGAGATTTGTCCGCTTGGTCAAAAGTGGTGGTCTGAAAGCCAAGCCTCATTTTGAAGTGAAGTTTAATGAGTCTGATATTCCCAAAGGTGGTGATAGGGCTTATGGGGCTTATATTCCCCCAGCACCTAGATCATTTGAATTCGTAGAAGATGTGGATCTATTGATCAGAAGGGCTGAGAGATGTTTAGAAGCAGGTGCAGACATGATAATGATTGATGCTGATGATGTCAGCAAACATGCTGATAATATGCGCGCGGATATTGTTGCCAAGATCATTGGGCGCCTTGGTCTTGAGAAGACCATGTTTGAAGCATCAAATCAGAAAACATCCGAGTGGTTCATCAAACAATATGGTCCAAAGGTGAATCTCTTTATTGATCATTCGCACGTGGTGGATGTGGAATGCCTCCGGGGACGCAACTTGGGTAGAAATCATGCTTCTGTCCTTGGTTCTTCATATTTTCTGTTCTGA 861 0.4599 MSAYRWKSFDENEDRPAKPRRFGVTEMRSPHYTLFSHNLLQDIFESMGDYVDGLKFSGGSHSLMPKATIKQVIDMAHQHDVYVSTGDWAEHMIRKGPSGFKEYVEECKQLGFDTIELNVGSLGIPEETLLRFVRLVKSGGLKAKPHFEVKFNESDIPKGGDRAYGAYIPPAPRSFEFVEDVDLLIRRAERCLEAGADMIMIDADDVSKHADNMRADIVAKIIGRLGLEKTMFEASNQKTSEWFIKQYGPKVNLFIDHSHVVDVECLRGRNLGRNHASVLGSSYFLF 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g1818 286 Gene3D Aldolase class I 7 274 IPR013785 -
Ssu5g1818 286 PANTHER REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED 13 286 - -
Ssu5g1818 286 MobiDBLite consensus disorder prediction 1 20 - -
Ssu5g1818 286 Pfam (2R)-phospho-3-sulfolactate synthase (ComA) 14 270 IPR003830 -
Ssu5g1818 286 PANTHER PROTEIN HEAT-STRESS-ASSOCIATED 32 13 286 - -
Ssu5g1818 286 SUPERFAMILY (2r)-phospho-3-sulfolactate synthase ComA 13 267 IPR036112 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g1818 4 286 Subtilisin-like Serine Gene Family AT4G21320 74.912 1.50e-167 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g1818 - - gmx:100805668 531.561