Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g1804 ATGATCATTGAGAAGAAGAGGGGAAGGGTCAAGGAATTGATGGAAGCCATGGATACTTTTGGCATTGAACTGATAGACACCAATGTTAAAACCACAAAAGGAGCATTTCTGATTTCAACCTGCATGCAGGGCATGGATGGTGAAACACGTGAAGCTCAGGAAACAAAAGAGTTGTTGCTAGATATAATCAGTGCCATATAG 201 0.4129 MIIEKKRGRVKELMEAMDTFGIELIDTNVKTTKGAFLISTCMQGMDGETREAQETKELLLDIISAI 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g1804 66 PANTHER TRANSCRIPTION FACTOR DYT1 1 66 - -
Ssu5g1804 66 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g1804 Ssu-Chr5 53938484 53938872 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g1804 1 65 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G21330 35.385 4.28e-06 40.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g1804 - - adu:107480552 85.8853