Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g1755 ATGGGTTGTGCGAATTCGGGGTTGAATTTGCAAATCTTCATCGTGTCAGTGTTGATTTTCACTGCAACTTTCTGTGTTGGGGACACTGACCCTCTTGATGTTGCGGCAATCAATAGTTTGTATGTGGCTCTTGGCTCACCACCCCTTCAGGGTGGAAAGCCGAAGGAGGAGATCCGTGTTTGGAACAATGGCAAGGTACAGCTGGGAGGCATGAATTTAAGTGGACAGCTGGGAAGTAATTTGAATTTCCCATCCATCATAGAATTGGATCTTAGCAACAACCAGATTGGAGGGACCATTCCGTCCACTTTGTCCCTTACTTTGAGGAACATGTCACTGTCAGCTAATCAGTTAAATGGAAGCATTCCGGATGCCTTATCCTCACTAACTCAATTGTCAGACTTGTCATTAAAAGATAACCTTCTGAATGGACAAATTCCAGATGCGTTTCTACAGCTCACTAGTTTGATGAATATGGATCTGTCCGGCAACAACTTGAGTGGTCAGTTGCCTCCCTCAATGGAGAATTTGTCATCTCTTACCACGTTaCATATGCAGAACAATCAACTTTCTGGGACCCTTTTTGTTTTGCAGGACCTCCCTCTTCAGGATCTGAATATAGAGAACAATATATTCTCTGGGCCAATTCCTCCAGAGTTGTTGAGTATCCCTAATTTCAGAAAAGACGGGAATCCATTTAATACTACTATCATTCCATTGCCTCCAACTGCTTCCCCTGCACCTGTTGCTATGGCTCCTTCCCCAGAAGAATCACCTTGGAAAGCGGCTGATAATCCCTCTGCTACAACAAAAGCACACGCACCAATACCTGCAACTGCAATTGCTGGGAGGtctttcaaaactaagaaattaGTTTGGATTGTTGGTGCAggcttttttatatttattgcattAGGATTTTGTCTTCTGATGTTCTGGTGCTTTAAGAGAAGACCAGAGAACAAGAATTATAAGAAACACAACATGAATGTGTATAAAAAATCTGTGCATAAACAAACATGCAGTGACTCCCATTTTGAAGCAACTAATGATGAGAAGAAAGGATGGGGTTCCAAACTTCCACCCCTGCAGCCAGCACCACCACTTCATCTCCCAATCATTCCTGGAGAGAATTTAATCATCAATCGAGCTATATCTACCAAAGCAACCGAAAGACAAAGTAGAACAAATTCCATCAAAGTTTTTACTGTTGCATCACTTCAGCAGTACACAAATAGTTTTTCCCAAGAAAATTATATTGGGGAGGGCACACTTGGCCCTGTTTATAAGGGTAAACTCCCTGATGGAAAGTTACTGGCAGTTAGGAAGCTGAATGCTACTGCTTCTATGGGGCAAAATCATGCACAATTTCTTCAATTAGCTTCCAATATCTCCAAAATTCAACATGCTAATATTGTAAAGCTTATGGGCTACTGTGCTGAGTATAGCCAACAACTACTTGTATACGAGTATTGCAGTAATGGGACCCTACATGATGCATTGCATACAGATGATGAACTTCAGATTAAACTTTCATGGGATGATCGCATTCAGGTGTCACTTGGAGCGGCAAGAGCTTTAGAGTATTTGCATGAACACTTTCAGCCGCCTATTATGCACCGAAACTTTAGGTCTGCTAATGTACTCCTCAATGACAAGTGGGAAGTGCGTGTCTCTGATTGTGGGTTAGGTTCTTTACTATCTTCAGGCTCTGCTAGTCAGTTGTCAGGACGCCACCTCGCAGCTAATGGTTACAGTGCTCCAGAGTTTGAGTATGGAAGTTATACACTGCAAAGTGATGTCTTTAGTTTTGGAGTTGTAATGCTAGAACTCCTCACTGGACGAAAATCCTATGACAGCTCCCGGCCTCTTGGAGAGCAATTTTTGGTGAGATGGGCAGTCCCTCAACTCCATGACATAGATGCATTGTCTAAAATGGTCGACCCCTCCTTACATGGAGCATATCCTAAAAAATCCTTGTCACGTTTTGCAGACATCATTTCTTCATGTATACAGCATGAACCTGAATTTCGACCAGCAATGTCAGAAATTGTTCAGGATCTCTTGCGAATGATGTAG 2079 0.4194 MGCANSGLNLQIFIVSVLIFTATFCVGDTDPLDVAAINSLYVALGSPPLQGGKPKEEIRVWNNGKVQLGGMNLSGQLGSNLNFPSIIELDLSNNQIGGTIPSTLSLTLRNMSLSANQLNGSIPDALSSLTQLSDLSLKDNLLNGQIPDAFLQLTSLMNMDLSGNNLSGQLPPSMENLSSLTTLHMQNNQLSGTLFVLQDLPLQDLNIENNIFSGPIPPELLSIPNFRKDGNPFNTTIIPLPPTASPAPVAMAPSPEESPWKAADNPSATTKAHAPIPATAIAGRSFKTKKLVWIVGAGFFIFIALGFCLLMFWCFKRRPENKNYKKHNMNVYKKSVHKQTCSDSHFEATNDEKKGWGSKLPPLQPAPPLHLPIIPGENLIINRAISTKATERQSRTNSIKVFTVASLQQYTNSFSQENYIGEGTLGPVYKGKLPDGKLLAVRKLNATASMGQNHAQFLQLASNISKIQHANIVKLMGYCAEYSQQLLVYEYCSNGTLHDALHTDDELQIKLSWDDRIQVSLGAARALEYLHEHFQPPIMHRNFRSANVLLNDKWEVRVSDCGLGSLLSSGSASQLSGRHLAANGYSAPEFEYGSYTLQSDVFSFGVVMLELLTGRKSYDSSRPLGEQFLVRWAVPQLHDIDALSKMVDPSLHGAYPKKSLSRFADIISSCIQHEPEFRPAMSEIVQDLLRMM 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g1755 692 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 388 692 - -
Ssu5g1755 692 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 9 334 - -
Ssu5g1755 692 PANTHER LEUCINE RICH REPEAT KINASE 2 9 334 - -
Ssu5g1755 692 Gene3D Transferase(Phosphotransferase) domain 1 492 692 - -
Ssu5g1755 692 PANTHER LEUCINE RICH REPEAT KINASE 2 388 692 - -
Ssu5g1755 692 Gene3D Phosphorylase Kinase; domain 1 377 491 - -
Ssu5g1755 692 Gene3D Ribonuclease Inhibitor 45 243 IPR032675 -
Ssu5g1755 692 SUPERFAMILY L domain-like 65 227 - -
Ssu5g1755 692 ProSiteProfiles Protein kinase domain profile. 414 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu5g1755 692 MobiDBLite consensus disorder prediction 246 271 - -
Ssu5g1755 692 Pfam Leucine rich repeat 131 190 IPR001611 GO:0005515
Ssu5g1755 692 Pfam Protein tyrosine and serine/threonine kinase 417 688 IPR001245 GO:0004672|GO:0006468
Ssu5g1755 692 SUPERFAMILY Protein kinase-like (PK-like) 394 688 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g1755 Ssu-Chr5 52621312 52627910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g1755 19 692 Strubbelig Receptor Gene Family AT4G03390 50.134 0.0 641
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Ssu5g1755 PK_Tyr_Ser-Thr 6.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g1755 - - gmx:100794130 1096.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g1755 5 52621312 52627910 Ssu1g0376 1 8774862 8781710 PCT