Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu5g1751 | ATGGCGGAGGGTGACGTGGACTTTTCGGAACTGTTCTCTGCTGCTGATGGGGACGATGATGGCATGTTTTATATAGATATTCAGACCGTTCTGAAGGTTCTCGATGAAGCCGATAGTTGTGACCCTCAGGAGAATAGTCCTGAGGATTCTTCATCAAAAAATGTTTCACCTAGTGAATTTGGCATTCATGAAACTGTTCAGATACCAAATGGATCTCAAGTGTTAGAAGAACCACATTTTTCTAGGTTGGACTTTGTGGATTCAGTCACGAGCTGTTCTCCATTCTGCTCAGATGTGTCAGATTCTGGGGCCAGAGGTTCAGTTGGTTTATCTGATTCTGCAGCAAATTCTTTGCTTGACTGTGAACGTGAAAACCAGGGACCTCAATCTCAGGCTTGCTCTTCCCCAAATGCTTTTCCTGGTAATTTCAGTGACTCATTCTCTCCAGGTGAAAGTGATGAGATTTTCTACACAGAAAGGACAGGAGTTTCTAAACATGAGATACCTGCTTATAGTGTGGAAACAAGTTTCCCTGAGGCACAGTCAAACAATATATCAATTTGTGGAGATAATTTGAATCTGAATATGTGGAAGGGTGAAAATGAGAGCCAATTCAAGCATGTGGGAGAGGATGTTGAATCTGAACATGCTTCACTCAGTTCTATTGTTGACAATGGGGATGTAAATATTGAAGATTATGTTGAAGACATCATTGGAGAAGTTTATGGGCAACAGGAAAATGACTCATGTACATCTTTCGAAACATCATTCATGGATGCTGATAGATCTTTGCATGTCGCAACTTCAACTGATTCTACTGTTGGTCAAGGTTCCCATGTTTCCAGTGATTTTGTTGACTACCATCTATCTTCAGATTGTTACCTGGGAACAGATGCTGGACCCTTTGTTGCTGACTCTTTTTATTTGCCTAATGGTATTTGTTCTCAATTGTGGACAAATGAAGAAATGATGAATAACATGAAGGTCGAAAATGCAGAGTTAAATGCTGATCTTGCATGTATGAGTAATGGCATTCCATCAAGCACTACTGGGTCGATATCTTTACAAGATAGTCAAATTATGTTAGCTGATAGTGGTTATCCATCATTTCATTCCGGTAAAGTTATTTTTGATGACATGTCATCCCTGCCTCTTTCAGCTTGTGCTTCATACATGTCATATGGAGACCATcaccaaaacaatttttacaatgtGGATGCTGAGTTCAATCTAGGCCAAGAGGTGAAACAAACACCAGGTATTTTTTCTTCTGTAGGGTGTCAGGCTTACAATTGTTTTAAGAATGAGGATAATTATGCAGTTATAACATCTGAGATATCCAATCAATATCAAGATAGCATTGGTGGAACTGCTAGTGTTCAAGGAAACATGAGCAATTTGAATGCAAAAGCTGCAGATATATCTTGGCCCCATGCCCAAGCACTAATTGCCAGTGAGAAACAGTTTGGTGACGTTAAGAGAGAAGGAGGGGGCAAAATGATTCAACATAAACTTATTGATACTCATCTGTCAAAAGGAACAACTGAGAATTTCCATATTGAGGAAGACCTTGATGTTTGCATTATTGAAGACATCAGTCATCCTGCTCCGACGAGTCGATCTGCAGACAGTGGGAATTCCCTTAATATATCTCAGTCTTCTAGATATGTTGATTCCCAGTCTTACATGGTTGGAAGCACAAGGCTGAAGGCATGTGATGAGCGAAATATATTACGAGTTGCATTGCAGGATTTATCTCAGCCAAAGTCAGAAGTTAGCCCACCAGAAGGATTGTTGGCAGTTCCTCTTTTAAGACATCAGAGAATTGCTTTATCATGGATGgttcaaaaggaaaaatcaagTTGGTATTGCTCAGGAGGAATTCTTGCAGATGATCAGGGACTTGGAAAAACAGTATCAACTATtgcattaatattaaaagagagaCCTCCATTACCTAATGGGTGCACCAATGCCCAAAAAAGTGAATTGAAAACTCTGAATCTTGATGTGGATGATGACGTGCTTCCTCAGAATGGTAGAGTAAAGGAAGAATCTAATATGTGCAAGGATAAGTCAAGTAGATATCCAATCAAGAGCATGAATTTGTTGATGCAAGCAAAGGGAAGGCCATCTGCTGGGACCCTTATTGTTTGCCCCACTAGTGTCCTGCGCCAATGGGCTGAGGAGTTGCGTAGTAAGGTAACTAGTCTGGCAAATCTCTCTGTGCTAGTATACCATGGAAGCAATCGGACAAAAGATCCTTATGAAGTGGCTAAGTATGATGTTGTTCTAACAACTTATTCCATTGTCAGCATGGAGGTTCCTAAGCAGCCTCTATCTGACAAAGATGATGAAGAAAAGGGAAATTTTGAAGATCATGCTGTACCaagtaggaaaagaaaaagcccTTCTAATTCTAGTAAAACTGGCAAGAAGACATTGGATGGCACAATTCTTGAGGCTGTTGCTCGGCCTCTTGCAAAGGTGGCATGGTTTAGGGTTGTCCTGGATGAGGCCCAGAGCATAAAGAATCACAAAACTCAAGTTGCAAGGGCCTGTTGGGGTCTTCGTGCTAAGCGAAGATGGTGTTTGTCAGGGACTCCCATCCAGAATGCAATCGATGATCTCTACAGTTACTTCAGATTTCTAAGATATGACCCTTATGCTGTCTATACATCATTCTGTTCTTCAATTAAGATCCCGATTAGTAGAAATCCAGCAAAAGGGTATAGAAAGCTACAAGCTGTCTTGAAGACAATAATGTTACGCCGGACAAAAGGCACACTTCTTGATGGGGAACCTATTATTTCCTTGCCGCCTAAATATGTAGAGCtgaaaaaagttgaattttcaATGGAGGAACGTGATTTCTATTCCAGACTAGAGGCTGATTCACGTGCACAGTTTCAGGAATATGCTGATGCTGGAACTGTCAAGCAAAATTATGTCAACATTTTGCTGATGCTTCTGCGCCTTAGACAAGCTTGTGATCACCCTTTACTTGTCAAGCGTTACAATTCTAACTCTCTATGGAGATCTTCAGTTGAGGTGGCAAAGAGGCTTCCTCAGGAAAAACAAATCTCTCTTCTGAAATGTTTAGAGGCTTCCTTGGCCCTCTGCGGCATTTGTAATGATCCTCCTGAAGATGCTGTTGTTTCATTTTGTGGCCATGTTTTCTGTAACCAATGCATCTGTGAACATCTTACTGGTGATGACAATCAGTGCCCTGCTACAAATTGCAAAAGTCGACTGAGTACATCTTTGGTACTTCCAAAAGCCACACTGAACAATTGTCTTTCTGACCAGGGTTGTGATAATTCACCTGGTTGCTCTGGTTCTGAAGTGGAAGAATTTGAGCCTTGGTCTCAAAGTCAGCCATATGactcttcaaaaataaaagctGCACTTGAGGTGTTGAAGTCATTGTGTAACCCACAGTGCTATACATCAAAAAGTATTTCTGAGCAAAAGGAAGATAATGACTGCTCTGGGAACCCCTCCAATGCTAACAATGAGAAATCCTTCAAAGATTCTCCTGAGAGTCAAAATTTGTCTGAGAATAGAAGCTCTAATGATTCAGTTACTGTTGTAGGGGAGAAAGCGATAGTGTTTTCTCAGTGGACAAGGATGCTAGATTTGCTTGAAGTGTGTCTTAAGAATTCTTCGATTCAGTATAGAAGGCTTGATGGAACAATGTCAGTTGCTGCAAGAGATAAAGCTGTTAAAGATTTTAACACTCTTCCTGAGGTATCAGTTATGATTATGTCTTTGAAGGCTGCCAGTCTTGGTCTAAACTTGGTGGTAGCTTGCCATGTTCTTATGCTAGATTTATGGTGGAATCCTACAACTGAAGACCAAGCAATAGATAGAGCACATCGAATTGGGCAGACTCGTCCTGTGACTGTTTTGCGGTTAACTGTGAGAGATACAGTTGAAGATCGTATTCTAGCTCTGCAGCAAAAGAAGAGAACGATGGTTGCATCTGCATTTGGGGAGGATGGAACTGGTGATCGTCAGAGTCGCCTCACTGTggatgatttaaaatatttgttcatGATGTGA | 4065 | 0.3988 | MAEGDVDFSELFSAADGDDDGMFYIDIQTVLKVLDEADSCDPQENSPEDSSSKNVSPSEFGIHETVQIPNGSQVLEEPHFSRLDFVDSVTSCSPFCSDVSDSGARGSVGLSDSAANSLLDCERENQGPQSQACSSPNAFPGNFSDSFSPGESDEIFYTERTGVSKHEIPAYSVETSFPEAQSNNISICGDNLNLNMWKGENESQFKHVGEDVESEHASLSSIVDNGDVNIEDYVEDIIGEVYGQQENDSCTSFETSFMDADRSLHVATSTDSTVGQGSHVSSDFVDYHLSSDCYLGTDAGPFVADSFYLPNGICSQLWTNEEMMNNMKVENAELNADLACMSNGIPSSTTGSISLQDSQIMLADSGYPSFHSGKVIFDDMSSLPLSACASYMSYGDHHQNNFYNVDAEFNLGQEVKQTPGIFSSVGCQAYNCFKNEDNYAVITSEISNQYQDSIGGTASVQGNMSNLNAKAADISWPHAQALIASEKQFGDVKREGGGKMIQHKLIDTHLSKGTTENFHIEEDLDVCIIEDISHPAPTSRSADSGNSLNISQSSRYVDSQSYMVGSTRLKACDERNILRVALQDLSQPKSEVSPPEGLLAVPLLRHQRIALSWMVQKEKSSWYCSGGILADDQGLGKTVSTIALILKERPPLPNGCTNAQKSELKTLNLDVDDDVLPQNGRVKEESNMCKDKSSRYPIKSMNLLMQAKGRPSAGTLIVCPTSVLRQWAEELRSKVTSLANLSVLVYHGSNRTKDPYEVAKYDVVLTTYSIVSMEVPKQPLSDKDDEEKGNFEDHAVPSRKRKSPSNSSKTGKKTLDGTILEAVARPLAKVAWFRVVLDEAQSIKNHKTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLRYDPYAVYTSFCSSIKIPISRNPAKGYRKLQAVLKTIMLRRTKGTLLDGEPIISLPPKYVELKKVEFSMEERDFYSRLEADSRAQFQEYADAGTVKQNYVNILLMLLRLRQACDHPLLVKRYNSNSLWRSSVEVAKRLPQEKQISLLKCLEASLALCGICNDPPEDAVVSFCGHVFCNQCICEHLTGDDNQCPATNCKSRLSTSLVLPKATLNNCLSDQGCDNSPGCSGSEVEEFEPWSQSQPYDSSKIKAALEVLKSLCNPQCYTSKSISEQKEDNDCSGNPSNANNEKSFKDSPESQNLSENRSSNDSVTVVGEKAIVFSQWTRMLDLLEVCLKNSSIQYRRLDGTMSVAARDKAVKDFNTLPEVSVMIMSLKAASLGLNLVVACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVLRLTVRDTVEDRILALQQKKRTMVASAFGEDGTGDRQSRLTVDDLKYLFMM | 1354 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu5g1751 | 1354 | ProSiteProfiles | Zinc finger RING-type profile. | 1041 | 1080 | IPR001841 | - | |
| Ssu5g1751 | 1354 | Pfam | Helicase conserved C-terminal domain | 1197 | 1296 | IPR001650 | - | |
| Ssu5g1751 | 1354 | MobiDBLite | consensus disorder prediction | 778 | 800 | - | - | |
| Ssu5g1751 | 1354 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 1190 | 1349 | IPR001650 | - | |
| Ssu5g1751 | 1354 | SMART | helicmild6 | 1213 | 1296 | IPR001650 | - | |
| Ssu5g1751 | 1354 | Gene3D | - | 1112 | 1354 | IPR027417 | - | |
| Ssu5g1751 | 1354 | Pfam | SNF2-related domain | 623 | 1002 | IPR000330 | GO:0005524|GO:0140658 | |
| Ssu5g1751 | 1354 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 714 | 887 | IPR014001 | - | |
| Ssu5g1751 | 1354 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 933 | 1353 | IPR027417 | - | |
| Ssu5g1751 | 1354 | SMART | ultradead3 | 599 | 904 | IPR014001 | - |
Showing 1 to 10 of 27 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
Event-related genes