Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g1633 ATGCGCCTTCTAACACACAACGGCTTCTTCACCAAAACAACATTACCATCACAGAACgTGTTTGAGCAACCAAAAGTTGTGGCTAACTTGACTGGAACCCaagatttgaattttgttgGTGGAGATATGTTCAAGTCCATCCCTTCTGCTGATGCAGTTGTACTCaagTGTGTTCTGCATGATTGGAATGATGAACTCTCCGTGAAGGTATTGAAGAACTGTAAAGAAGCTATTTCTAGCAAAGGAAAAGAAGGAAATGTTATAATCATAGACATAGCAATTGATGAAGCAAGCGATGATCGCGAATTGACTGAGTTGAAGCTGGACTATGACTTGGTGATGCTGGCCATGTTGAatggaaaataa 366 0.3825 MRLLTHNGFFTKTTLPSQNVFEQPKVVANLTGTQDLNFVGGDMFKSIPSADAVVLKCVLHDWNDELSVKVLKNCKEAISSKGKEGNVIIIDIAIDEASDDRELTELKLDYDLVMLAMLNGK 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g1633 121 PANTHER ISOFLAVONE 4'-O-METHYLTRANSFERASE 19 121 - -
Ssu5g1633 121 Gene3D Vaccinia Virus protein VP39 17 121 IPR029063 -
Ssu5g1633 121 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 121 IPR016461 GO:0008168
Ssu5g1633 121 PANTHER O-METHYLTRANSFERASE 19 121 IPR016461 GO:0008168
Ssu5g1633 121 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 21 120 IPR029063 -
Ssu5g1633 121 Pfam O-methyltransferase domain 20 121 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g1633 Ssu-Chr5 50187133 50189380 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g1633 21 120 Monolignol Biosynthesis Gene Families AT1G51990 34.653 7.85e-18 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g1633 - K22588 gmx:106795493 173.326