Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g1618 ATGTCTGTCCCTTCCTTTGCTTCCACTTCTCTTTCATTTCTACTCAcatctttctttgttttcttcattttgagTGGAACTTCATCTTGCTTAGCCATACCTACCAACACTACACGGCCCCCTCGCCAACTCTCAGTAAACTACTATGCCAAATCATGCCCCCAGCTAGAACAGCTTGTTGGCTCAATCACCTCTCAACAATTCAAACAATCACCCGTTTCTGGCCCTGCCACCATTCGTCTCCTCTTCCATGATTGCTTTGTAGGAGGCTGTGATGCATCAATTTTAATTGCATCAAAGCCTGGGAGCAAGGAGTTGGCAGAGAAGGATGCAGAGGATAATAGGGAATTGAAGGTGGAAGGTTTTGAGACTGTAAGAAAGGCTAAGGAACTAGTGGAGAGAAAGTGCCCGGGTGTGGTGTCATGTGCGGACATTCTTGTAATTGTAGCCAGAGATTATGTACACCTGGCAGGAGGGCCCTATTACCAAGTGAAGAAGGGAAGATGGGATGGAAAGATATCAACGGCATCAAGGGTGGGGAACAACATCCCTCGTGCAAACTCCACCGTTGATCAACTCATCAAACTCTTCAACTCAAAAGGCTTATCCGTACAGGACTTGGTGGCCCTTTCGGGGGCCCACACAATTGGGTTTGCCCATTGCAAACACTTCGTGGCCCGCCTCTATAGTTACGGGGCCAAGGCCCAACCCGACCCAAATATGGACCCCAAACTATTGCATGCACTCAGAATGTATTGTCCAAACTTTGGTGGAAACTCAGGACATTGTTGCCCCATTTGA 801 0.4657 MSVPSFASTSLSFLLTSFFVFFILSGTSSCLAIPTNTTRPPRQLSVNYYAKSCPQLEQLVGSITSQQFKQSPVSGPATIRLLFHDCFVGGCDASILIASKPGSKELAEKDAEDNRELKVEGFETVRKAKELVERKCPGVVSCADILVIVARDYVHLAGGPYYQVKKGRWDGKISTASRVGNNIPRANSTVDQLIKLFNSKGLSVQDLVALSGAHTIGFAHCKHFVARLYSYGAKAQPDPNMDPKLLHALRMYCPNFGGNSGHCCPI 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g1618 266 ProSitePatterns Peroxidases active site signature. 75 86 IPR019794 GO:0004601
Ssu5g1618 266 PANTHER PEROXIDASE 25-RELATED 32 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu5g1618 266 CDD secretory_peroxidase 43 261 IPR033905 GO:0004601|GO:0042744
Ssu5g1618 266 PRINTS Haem peroxidase superfamily signature 75 89 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu5g1618 266 PRINTS Haem peroxidase superfamily signature 158 170 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu5g1618 266 PRINTS Haem peroxidase superfamily signature 140 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu5g1618 266 PRINTS Haem peroxidase superfamily signature 206 221 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu5g1618 266 ProSitePatterns Peroxidases proximal heme-ligand signature. 206 216 IPR019793 -
Ssu5g1618 266 SUPERFAMILY Heme-dependent peroxidases 43 262 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu5g1618 266 Gene3D - 47 183 - -
Ssu5g1618 266 PANTHER PEROXIDASE 19 32 261 - -
Ssu5g1618 266 Gene3D Peroxidase, domain 2 184 258 - -
Ssu5g1618 266 Pfam Peroxidase 64 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu5g1618 266 PRINTS Plant peroxidase signature 205 217 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu5g1618 266 PRINTS Plant peroxidase signature 53 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu5g1618 266 PRINTS Plant peroxidase signature 139 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu5g1618 266 PRINTS Plant peroxidase signature 77 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu5g1618 266 PRINTS Plant peroxidase signature 158 173 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu5g1618 266 PRINTS Plant peroxidase signature 120 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu5g1618 266 ProSiteProfiles Plant heme peroxidase family profile. 43 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g1618 Ssu-Chr5 49794099 49798298 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g1618 11 266 Peroxidase AT2G34060 61.303 1.70e-117 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g1618 K00430 - gmx:100777463 454.907