Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g1615 ATGGGTTCAGGTGATTGGTTTAAGACAATAATTAgcttaagaaaatcaaaagaagGCAGATCAAAGAAAGTAAAGACTAAGAATTATAGAGGAAAAAAGTCCAATGGTTTAGCAAATGgctttaaaagtgaaaatctaGTGTCCGCTGGGGTATCAGTTGAAACTATTGCTGCAACAAGGATCCAAACGGCATTCCGGGCTTATAAGGCTAGAAAATATTTACGTCGCTTGAAAGGATTCACAAAACTGAAGATCCAGACTCAAGGTTGCTCTGCTCAAAAACAAGCCGTTACAACCATAACTTATCTTCATTCATGGAGCAAGATACAGGCTGAGATTAGAGCTCGCCGAATATGTATGGTGACAGAAGACAGGATCAGGAGGAAGAAACTACATTCTCAACTAAAACTTGAGGCCAAGATTCATGACCTAGAGGTGGAATGGTGTGGTGGTTCTGAAACCATGGAGGAAATCCTTGCAAGGTTACATCAGAGAGAAGAAGCAGCAGTCAAGAGGGAAAGAGCCATGGCATATGCCTTCTCTCATCAGTGGAGGGCCAACTCTAGCCAAGGGCTAGGTAACTATGAACTTGGCAAAGCTAGTTGGGGTTGGAGCTGGAAGGACCGTTGGATCGCTGCGCGTCCTTGGGAAAGCCGTGTCCCCAGTGCAACCATTAGCCCCAAGAAAGATCAAAATAGGAAGCCAAGTAAAGTTGACAAGGATAAGAAGTCATCAACATCAAAACAGCCAGTTTCAGTTAAGCCTCCTTCAGCTAATGCTAAAGGGACTAATCCCTTAGGTAATGCAAAAGGGACTACTAAAGCTAGAAGAAGGTTGTCTTACCCAACCACGGATAAAACAGCAGTGCACGAAGGAAAGCAATGA 885 0.4203 MGSGDWFKTIISLRKSKEGRSKKVKTKNYRGKKSNGLANGFKSENLVSAGVSVETIAATRIQTAFRAYKARKYLRRLKGFTKLKIQTQGCSAQKQAVTTITYLHSWSKIQAEIRARRICMVTEDRIRRKKLHSQLKLEAKIHDLEVEWCGGSETMEEILARLHQREEAAVKRERAMAYAFSHQWRANSSQGLGNYELGKASWGWSWKDRWIAARPWESRVPSATISPKKDQNRKPSKVDKDKKSSTSKQPVSVKPPSANAKGTNPLGNAKGTTKARRRLSYPTTDKTAVHEGKQ 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g1615 294 MobiDBLite consensus disorder prediction 279 294 - -
Ssu5g1615 294 PANTHER IQ-DOMAIN 5-RELATED 1 285 - -
Ssu5g1615 294 ProSiteProfiles IQ motif profile. 54 82 IPR000048 GO:0005515
Ssu5g1615 294 MobiDBLite consensus disorder prediction 230 247 - -
Ssu5g1615 294 PANTHER IQ-DOMAIN 9 1 285 - -
Ssu5g1615 294 MobiDBLite consensus disorder prediction 221 294 - -
Ssu5g1615 294 MobiDBLite consensus disorder prediction 248 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g1615 Ssu-Chr5 49718666 49721542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g1615 1 282 IQD Protein Family AT2G33990 53.004 3.42e-89 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g1615 - - gmx:100802963 492.271