Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g1555 ATGTGTCCAAAGAAAGACACTTCAAACAGCAATCTAGCACCTCTTGATGCTACAAGTACTTTGATGTTCGACAATGAGTATTATAGAAATGTCCTAAACAACACAGGGCTTCTAGAATCTGACCAAGCACTAATTGGGGATCGAAGGACTGCTCCTATGGTTTATTATTACAGCAACAACCAACTTTCCTTCTATAATGATTTTGCTGCATCCATGATGAAGCTTAGTAATGTAGGAGTACTTACAGGAATAAAAGggaaaattagaaagaaatgtGGCTCTGTAAACTAA 291 0.354 MCPKKDTSNSNLAPLDATSTLMFDNEYYRNVLNNTGLLESDQALIGDRRTAPMVYYYSNNQLSFYNDFAASMMKLSNVGVLTGIKGKIRKKCGSVN 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g1555 96 Pfam Peroxidase 2 60 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu5g1555 96 Gene3D - 76 96 - -
Ssu5g1555 96 ProSiteProfiles Plant heme peroxidase family profile. 1 96 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu5g1555 96 PRINTS Plant peroxidase signature 30 47 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu5g1555 96 PRINTS Plant peroxidase signature 14 29 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu5g1555 96 PRINTS Plant peroxidase signature 70 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu5g1555 96 PANTHER PEROXIDASE 72-RELATED 1 95 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu5g1555 96 PANTHER PEROXIDASE 10 1 95 - -
Ssu5g1555 96 Gene3D Peroxidase, domain 2 2 75 - -
Ssu5g1555 96 SUPERFAMILY Heme-dependent peroxidases 2 96 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g1555 Ssu-Chr5 48552056 48552346 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g1555 2 93 Peroxidase AT1G49570 54.348 2.50e-28 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g1555 K00430 - gmx:100812961 165.622