Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g1542 ATGGACCCAACCGCCAACGAGGTTGTCCGCGAGTTCCCTCGCCTCTTCCGCGTCTACAAAGACGGGCGCGTGGAGCGCCTCCTCGGCACCGAAACCACCCCACCCGGCGCCGACCCCCGCACCGCCGTCCAATCCAAAGACGTCACCGTCAACCCCCAAACCGGCGTCGCCGTCCGCCTTTACCTCCCTCCGACCGCCGCCTCCTCCCCCGCCAAACTCCCTCTTCTGATCTACGTCCACGGCGGCGCCTTCTGCATCTGCACCCCCTTCAACCCCGcctaccaccaccacctcaACGCCGTCTCCGCCGCCGCCAACGTCGTCGTCGCCTCCGTCCACTACCGCCTCGCGCCGGAGCACCCTCTCCCCGCGGCCTACGACGACACCTGGGAGGCCGTGCAGTGGGTGGCTTCCCACGGCGCCGGCGCCGGACCCGAGCCGTGGCTCAACGACCACGCCGACCTCGGAGCGGCGTTCCTGGCCGGCGACAGCGCCGGCGCCAACATCGCGCACAACATGGCGATGCGGGGCACCGCAGAAGGGTTGGGGGGGTTGAAGCTGGAAGGGATGGTGCTGATTCACCCTTACTTCGGGAACGATAAAAAAGACGAGCTGGTGGAGTATCTGTACCCTACGTATGGGGGAATCGGCGACCCGAAGATTCACGCGACGCGGGATCCGAAACTCTCGGGCATGGGGTGCCCCAGGGTTCTGGTGTTCGTGTCGGAGAAGGATTTTCTGAGGGAGAGAGGCGTGAGCTATTACGAGGCGCTGAAGAAGAGTGGGTGGAAGGGTAAGGTGGACATGGTGGAGTACCAAGGGGAGGACCACGTGTTTCACTTGTTCGACCCCACTAAGGAAAACTCTGTGGACCTCGTTAAACAGTTTGTCGCTTTCATGAAGCAAATCCAGGCGCGCTGTTGA 924 0.6277 MDPTANEVVREFPRLFRVYKDGRVERLLGTETTPPGADPRTAVQSKDVTVNPQTGVAVRLYLPPTAASSPAKLPLLIYVHGGAFCICTPFNPAYHHHLNAVSAAANVVVASVHYRLAPEHPLPAAYDDTWEAVQWVASHGAGAGPEPWLNDHADLGAAFLAGDSAGANIAHNMAMRGTAEGLGGLKLEGMVLIHPYFGNDKKDELVEYLYPTYGGIGDPKIHATRDPKLSGMGCPRVLVFVSEKDFLRERGVSYYEALKKSGWKGKVDMVEYQGEDHVFHLFDPTKENSVDLVKQFVAFMKQIQARC 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g1542 307 PANTHER ARYLACETAMIDE DEACETYLASE 5 302 - -
Ssu5g1542 307 SUPERFAMILY alpha/beta-Hydrolases 15 303 IPR029058 -
Ssu5g1542 307 Gene3D alpha/beta hydrolase 13 305 IPR029058 -
Ssu5g1542 307 PANTHER CARBOXYLESTERASE 2-RELATED 5 302 - -
Ssu5g1542 307 Pfam alpha/beta hydrolase fold 76 280 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g1542 Ssu-Chr5 48351029 48351952 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g1542 6 301 Carbohydrate Esterase AT3G48700 43.827 5.96e-91 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g1542 - - gmx:100799964 490.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2533 2 84338764 84339696 Ssu5g1542 5 48351029 48351952 PCT