Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g1541 atGGCAGCAAAAGAGAACGAGATAACCCACGAGTTTCGCTTTTTCCGTGTTTACAAAGACGGCACAGTGGAGCTTTTCAAACCCCCCGCCGACCTGAACGCGCAAAAGATTGCCCCTTTCGATGACCCCACCACTGGCGTTCGCTCCAAAGACGCCGTCGTTTCCACCCACCCACCCGTTCCGGTTCGGATCTTCCTACCTCCAATAGCCGACCCGACCCGAAAACTCCCCCTCCTCCTCTACATCACCGGTAGCGGGTTCTGCTTAGATATCGCCTTCTCCTCCTCGTACCACCACATCGTCGCCACCGCCGCCGCTGAAGCCAACGTCATCGCCGTCTCCGTGAAGTACGGGTTGTTCCCGACCCGACCCATACCCGGTTGCTACGAGGACTCCTGGGCCGCGCTCCAGTGGGTCGCGTCGCACGCTAGTGGAAGTGGACCCGAGCCCTGGCTGAATGACCACGCCGATCTGCACCGCGTTTTCATCGCCGGCGATAGCTGCGGCGGCAACATAACCCACACGCTGTTGAGTAGGGTCGGGAAGTTGGGGTTACCGGGTGCGAAGGTTGTCGGGGCGGTTTTGGTGCACCCGTTTTTCGCGGGTGTAAGGAAGATTGATGAGATGTGGATGTACATGTGTCCGGGGAACGAGGGGTCGGAGGATCCTAGGATGAAACCGGCCGCAGAGGATCTCGCTAGGCTTGGGTGTGAGAGGGTGTTGGTGTTTGTTGCTGAGAACGACTATTTCTTCCGCCCTGGAAGCAACTATGTTGAGGAGCTTAAGAAGAGTGGGTGGGGTGGGAATGTTGAGCTTATAGCCCACGAGTTTCCCTTTTTCCGTGTTTACAAAGACGGCACAGTGGAGCTTTTCAAACCCCCCGCCGCCGACGCCGCGCAAAAGAAGATTACCCCTTTCGATGACCCCACCACCGGCGTTCGCTCCAAAGACGCCGTCGTTTCCACCCACCCACCCGTTTCGGTTCGGATCTTCCTCCCTCCAATAACCGACCCGACCCAAAAACTCCCGATCCTCCTCTACATGCACGGCGGCGGCTTCTGCATGCAATCCGCCTTCTCCTCCAGGTACCACAACATCGTCGCCAACGCCGCCGCCGAAGCCAACGTCATCGCCGTCTCCGTGGAGTACGGGTTGTTCCCGACCCGACCCATACCCGCATGCTACGAGGACTCCTGGGCCGCGCTCCAGTGGGTCGCGTCGCACGCTAGTGGAAGTGGACCCGAGACCTGGCTCAACGACCACGCCGATTTGCAGAGAATTTTCATCGGCGGCGACAGCGCCGGCGGGAACATAACCCACACGTTGGTGAGCCGGGTCGGGAAGTTCGGGTTACCGGGCGCGAAGGTTGTCGGGGCGATTTTGGTGCACCCGTATTTCGCGGGTATGAGGTGGGACGATGAGATGTGGATGTACATGTGTCCGGCGAACGAGGGaaaaatggccACAAAAAATAACGAGATAACCCACGAGTTTCCCTTTTTCCGTGTTTACAATGACGGCACAGTGGAGCTTCTACAACCCCCTCCCGCCGCCACCGCCGCCGCCCAAAAGATTGCCCCTTCCGATGACCCCACCACCGGCGTTCGCTCCAAAGACGCCGTCGTTTCCACCCACCCACCCGTTTCGGTTCGGATCTTCCTCCCTCCAATAACCGACCCTGCCCGAAAACTCCCCCTCCTCCTCTACGTCCACGGTGGCGGGTTCTGCTTCGATTCCGCCTTCTCCTCCACGTACCACAACCTCGTCGCCACCACCGCCGCCGAAGCCAACGTCATAGCCGTCTCCGTGGAGTACGGGTTGTTCCCGACCCGACCCATACCCGCATGCTACGAGGACTCCTGGGCCGCCCTCCAGTGGGTCGCGTCACACGCTAGTGGAAGTGGACCCGAGCCCTGGCTGAACGACCACGCCGATCTGCACCGCGTGTTCATCGCCGGCGACAGCGCCGGCGGGAACATAACCCACACGTTGGTGAATTGGGTCGGGAAGTTCGGGTTACCGGGCGCGAATGTTGTCGGGGCGATTTTGGTGCACCCGTACTTCGGGGGTGTGCGGAACGACGATGAGATGTGGATGTACATGTGTCCCGGGAACGAAGGGTCGGAGGATCCTAGGATGAAACCGGCCGCAGAGGATCTCGCTAGGCTTGGGTGTGAGAGGGTGTTGGTGTTTGTGGCTGAGAACGACCATTTGTTCCACCCTGGAAGCAACTATGTTGAGGAGCTTAAGAAGAGTGGGTGGGGTGGGAGTGTTGAGCTTGTTCAGAATTGGGGTTTGGGACATTGCTTTCATGTCTTCGACCCCCAACACGACAAGGCAAAGGAATTCGAAGTAGCCCTCGATTTCTCACCCCTTCTCAAAGTCTACAAAGACGGACGCGTGGAGAGACTCATGGGGTGCGACGTCGTTCCGCCGTGTCAAGATCCCGCGACAAACGTGGAATCCAAAGACGTCGTGATCTCCAAAGACGACGACGTATCCGTCAGGATCTTCATTCCCAAACTCGACGATCCATCCCAAAAGCTCCCTCTCCTCGTGTACTTCCACGGCGGGGCTTTCTGCATAGAAACACCCTCCTCACCTCCTTACCACAAATTCCTCAACTCAATAGTTTCCAAGGCCCACATCGTTGGTGTCTCCGTTCATTACAGAAGAGCCCCAGAGCACCCGGTTCCCATCGCTTACGAAGATTCGTGGACTTCGCTCAAATGGGTCGCGTCCCATTTCAACGGAAACGGCCCCGAGGAGTGGCTCAATCGCCACGCTGATTTCGGGAACGTGTTTTTCGCTGGGGACAGTGCGGGAGCAAACATCGCACACCACATGGGTATTCGGGTCGGGACCCACGGGCTTCCGGGTGTCAACCTTGAAGGAATTGCTTTGGTGCATTCGTACTTTTGGGGCCTGGAGCGAGATCCGAATCTGGGGAAGCTGGCTTGCAAGAGAGTGTTGGTTTGTGTTGCGGAGAATGATTTGCTGAAGGACAGGGGCTGGTATTATAAGGAATTGCTGGAGAAGTGTGGGTGGCACGGTGTTGTGGAAGTGATGGAGGCAAAAGGAGAAGGCCACGTGTTTCATTTGTTCAATCCTGATTCTGACAACGCTCCTCTTCCAATTCCTTCTCAGAAACTCGGAAAACCTTTACACTCTACACCACCGTCATATACCATGGATTCAACCTCTACCAACAGTGAAGTAGCCTATGATATCCCCCCCATCCTCAAAGTTTACAAAAACGGTCGCATAGAGAGGCTAGCCGGCGTCGAGGTTCTTCCTCCGTCTCTTGATCCCGAAACCAACGTCGAATCTAAAGACGTGGTAATCTCCGAAGAAGATGGCATATCTGCGAGGCTTTTCATTCCCAAATCCACTTACCCCCCACCGCAAAAGCTCCCTCTCCTTGTTTACTTCCACGGCGGTGCCTTCCTCATCGAAACCCCGTTTTCTCCAAACTACCACAACCTCCTCAACAACATTGTTTCACGGACGAATGTAATCGGTGTCTCTGTCCACTACCGGAGGGCGCCGGAGCACCCGGTTCCCACTTGCCACGAAGATTCGTGGGTTGCACTCAAATGGGTTGCTTCGCACGTGGGTGGAAACGGCCCTGACGAGTGGCTGAACAACCACGCAGATTTTGGGAAAGTGTTCTTCGCCGGTGACAGCGCGGGTGCCAACATAGCAAGCTATTTGGGCATTCGGGTTGGGACAGAAGGGTTGGATGGTGTGAAGATTGAAGGGATTGCTTTGGTGCATCCTTATTTTTGGGGAGTGGAACCGCTTGAGTGTGAGGCAAAGCGGGCTGAACAAGCTGCCAAGGTACACCAATTGTGGCGTTTTTCATGTCCAAGCACGACGGGATCCGACGACCCGATAATCAACCCGGGTAAGGATCCGAATCTGGGAAACCTAGCTTGTGGCAGAGTGCTTGTTTGTGTGGCTGAGAAGGATTTGTTGAAGAATAGGGGTTGGTACTATAAAGAATTACTTGATAAAAGTGCGTGGTCTGGAGTTGCGGAGGTGGTGGAGACAAAGAATGAGGACCACGTGTTTCATATGTTGAATCCAAACTCTTTCTTTTCTAGAATTTACCCCTCAAAATATGAGGATGTTTCTGTCAGAAGGATCATTTCTAATTCACCGGAATGTATAGTAGCATGA 4182 0.555 MAAKENEITHEFRFFRVYKDGTVELFKPPADLNAQKIAPFDDPTTGVRSKDAVVSTHPPVPVRIFLPPIADPTRKLPLLLYITGSGFCLDIAFSSSYHHIVATAAAEANVIAVSVKYGLFPTRPIPGCYEDSWAALQWVASHASGSGPEPWLNDHADLHRVFIAGDSCGGNITHTLLSRVGKLGLPGAKVVGAVLVHPFFAGVRKIDEMWMYMCPGNEGSEDPRMKPAAEDLARLGCERVLVFVAENDYFFRPGSNYVEELKKSGWGGNVELIAHEFPFFRVYKDGTVELFKPPAADAAQKKITPFDDPTTGVRSKDAVVSTHPPVSVRIFLPPITDPTQKLPILLYMHGGGFCMQSAFSSRYHNIVANAAAEANVIAVSVEYGLFPTRPIPACYEDSWAALQWVASHASGSGPETWLNDHADLQRIFIGGDSAGGNITHTLVSRVGKFGLPGAKVVGAILVHPYFAGMRWDDEMWMYMCPANEGKMATKNNEITHEFPFFRVYNDGTVELLQPPPAATAAAQKIAPSDDPTTGVRSKDAVVSTHPPVSVRIFLPPITDPARKLPLLLYVHGGGFCFDSAFSSTYHNLVATTAAEANVIAVSVEYGLFPTRPIPACYEDSWAALQWVASHASGSGPEPWLNDHADLHRVFIAGDSAGGNITHTLVNWVGKFGLPGANVVGAILVHPYFGGVRNDDEMWMYMCPGNEGSEDPRMKPAAEDLARLGCERVLVFVAENDHLFHPGSNYVEELKKSGWGGSVELVQNWGLGHCFHVFDPQHDKAKEFEVALDFSPLLKVYKDGRVERLMGCDVVPPCQDPATNVESKDVVISKDDDVSVRIFIPKLDDPSQKLPLLVYFHGGAFCIETPSSPPYHKFLNSIVSKAHIVGVSVHYRRAPEHPVPIAYEDSWTSLKWVASHFNGNGPEEWLNRHADFGNVFFAGDSAGANIAHHMGIRVGTHGLPGVNLEGIALVHSYFWGLERDPNLGKLACKRVLVCVAENDLLKDRGWYYKELLEKCGWHGVVEVMEAKGEGHVFHLFNPDSDNAPLPIPSQKLGKPLHSTPPSYTMDSTSTNSEVAYDIPPILKVYKNGRIERLAGVEVLPPSLDPETNVESKDVVISEEDGISARLFIPKSTYPPPQKLPLLVYFHGGAFLIETPFSPNYHNLLNNIVSRTNVIGVSVHYRRAPEHPVPTCHEDSWVALKWVASHVGGNGPDEWLNNHADFGKVFFAGDSAGANIASYLGIRVGTEGLDGVKIEGIALVHPYFWGVEPLECEAKRAEQAAKVHQLWRFSCPSTTGSDDPIINPGKDPNLGNLACGRVLVCVAEKDLLKNRGWYYKELLDKSAWSGVAEVVETKNEDHVFHMLNPNSFFSRIYPSKYEDVSVRRIISNSPECIVA 1393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g1541 1393 PANTHER 2-HYDROXYISOFLAVANONE DEHYDRATASE-LIKE 273 486 - -
Ssu5g1541 1393 Pfam alpha/beta hydrolase fold 852 971 IPR013094 GO:0016787
Ssu5g1541 1393 Pfam alpha/beta hydrolase fold 567 771 IPR013094 GO:0016787
Ssu5g1541 1393 Pfam alpha/beta hydrolase fold 1141 1360 IPR013094 GO:0016787
Ssu5g1541 1393 Pfam alpha/beta hydrolase fold 986 1033 IPR013094 GO:0016787
Ssu5g1541 1393 Pfam alpha/beta hydrolase fold 345 471 IPR013094 GO:0016787
Ssu5g1541 1393 Pfam alpha/beta hydrolase fold 79 273 IPR013094 GO:0016787
Ssu5g1541 1393 PANTHER ARYLACETAMIDE DEACETYLASE 1080 1364 - -
Ssu5g1541 1393 PANTHER ARYLACETAMIDE DEACETYLASE 273 486 - -
Ssu5g1541 1393 PANTHER 2-HYDROXYISOFLAVANONE DEHYDRATASE-LIKE 1080 1364 - -
Ssu5g1541 1393 SUPERFAMILY alpha/beta-Hydrolases 791 1039 IPR029058 -
Ssu5g1541 1393 Gene3D alpha/beta hydrolase 12 283 IPR029058 -
Ssu5g1541 1393 Gene3D alpha/beta hydrolase 792 1043 IPR029058 -
Ssu5g1541 1393 Gene3D alpha/beta hydrolase 284 503 IPR029058 -
Ssu5g1541 1393 Gene3D alpha/beta hydrolase 1080 1371 IPR029058 -
Ssu5g1541 1393 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 161 173 IPR033140 -
Ssu5g1541 1393 PANTHER 2-HYDROXYISOFLAVANONE DEHYDRATASE-LIKE 492 783 - -
Ssu5g1541 1393 PANTHER 2-HYDROXYISOFLAVANONE DEHYDRATASE-LIKE 784 1042 - -
Ssu5g1541 1393 SUPERFAMILY alpha/beta-Hydrolases 33 286 IPR029058 -
Ssu5g1541 1393 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 1223 1235 IPR033140 -
Ssu5g1541 1393 PANTHER 2-HYDROXYISOFLAVANONE DEHYDRATASE-LIKE 6 273 - -
Ssu5g1541 1393 Gene3D alpha/beta hydrolase 504 788 IPR029058 -
Ssu5g1541 1393 SUPERFAMILY alpha/beta-Hydrolases 301 468 IPR029058 -
Ssu5g1541 1393 SUPERFAMILY alpha/beta-Hydrolases 1081 1365 IPR029058 -
Ssu5g1541 1393 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 649 661 IPR033140 -
Ssu5g1541 1393 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 934 946 IPR033140 -
Ssu5g1541 1393 SUPERFAMILY alpha/beta-Hydrolases 505 780 IPR029058 -
Ssu5g1541 1393 PANTHER ARYLACETAMIDE DEACETYLASE 492 783 - -
Ssu5g1541 1393 PANTHER ARYLACETAMIDE DEACETYLASE 784 1042 - -
Ssu5g1541 1393 PANTHER ARYLACETAMIDE DEACETYLASE 6 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g1541 Ssu-Chr5 48270244 48335373 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g1541 491 783 Carbohydrate Esterase AT3G48700 40.557 6.19e-64 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g1541 - - gmx:100815625 551.206