Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g1539 ATGATAAGGTGCACAAGCTACAGTGGACGCCAGCCACCGAAATACCTTAACGTCCCAACAAAATCAAACTTCCCATTCGTGAATTTGATTAGCCATTCCTTCCTTCCATCCCTTCCCCTTAAAGCTTATAAGCCTCTTCCAATTCCTTCTCAGAAACTTGGAAAACGTTTACACTCTACGCCGCCCTCATCCATCATGGATTCAACCACTGCAGACAGTGAAGTAGCCTATGACCTCTCCCCCGTCCTCAAAGTCTACAAAAGCGGTCGCATAGAGAGGCTAGCCGGCGTCGAGGTTCTTCCTCCGTGTCTTGATCCCGAAACCAACGTTGAATCTAAAGACGTCGTAATCTCCGAAGAAGACGGCATATCTGCGAGGCTTTTCATTCCCAAAGCCACTTATCCCCCACCGCAAAAGCTCCCTCTCCTTGTTTACATCCACGGCGGAGGGCACCGGAACACCCGGTTCCCACTGGCCACGAAGATTCGTGGGTCGCACTCAAATGGGTCGCTTCGCATGTGGGTGGAAACGGCCCTGAGGAGTGGCTGA 549 0.5155 MIRCTSYSGRQPPKYLNVPTKSNFPFVNLISHSFLPSLPLKAYKPLPIPSQKLGKRLHSTPPSSIMDSTTADSEVAYDLSPVLKVYKSGRIERLAGVEVLPPCLDPETNVESKDVVISEEDGISARLFIPKATYPPPQKLPLLVYIHGGGHRNTRFPLATKIRGSHSNGSLRMWVETALRSG 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g1539 182 Gene3D alpha/beta hydrolase 82 179 IPR029058 -
Ssu5g1539 182 PANTHER ARYLACETAMIDE DEACETYLASE 71 151 - -
Ssu5g1539 182 SUPERFAMILY alpha/beta-Hydrolases 67 151 IPR029058 -
Ssu5g1539 182 PANTHER CXE CARBOXYLESTERASE 71 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g1539 Ssu-Chr5 48260189 48260837 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g1539 72 150 Carbohydrate Esterase AT3G48690 56.250 4.30e-23 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g1539 - - gmx:100800733 202.986