Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g1536 ATGGGTGAGTGTAAACGCTGCGCTCTCACAATTGCCGCCATGGAAGAAGCTTCTTCAAGCGAACCTACCATttccaaaaaaaggaaaactacCGCTAATTCTGCTAATTCCTTCGAGTTGCAGTTACGCTCTTCCAATACGCAGCAGTGGTTTCCCGACACAACCGTCTCGGCGGAAGCCTCCGTCAATTCCGCCGGCACGGTGGTTTCCGGTGAATTTTGCTCGGATCGCTCCTGCTGCAGCTCCAGCTATGTTAAGGAGCTCCACACCACGCCGTTAGATCTGCAGACCAAGGGTTTCGAAACGGTAGACTCAACCAACCGCAATTTCAAATCGTTCAGTTTGTCGAGTGAGTTTTCTGGAGACTCGGAAGAATCGACGTTGTTTCCGGCGAAGTCTTCGGCGGCGCGGAAAGTGAAGACGCCGCCAAAGGCCGAGATCGAAGAGTTTTTCGCAATGGCTGAAAAGTACGAGCAAAAGCGGTTCGCAGAGAAGTACAACTTTGATATTGTTAGAGATATGCCGTTGGAGGGTCGCTACCAGTGGGTTCGTTTACATTAA 561 0.4938 MGECKRCALTIAAMEEASSSEPTISKKRKTTANSANSFELQLRSSNTQQWFPDTTVSAEASVNSAGTVVSGEFCSDRSCCSSSYVKELHTTPLDLQTKGFETVDSTNRNFKSFSLSSEFSGDSEESTLFPAKSSAARKVKTPPKAEIEEFFAMAEKYEQKRFAEKYNFDIVRDMPLEGRYQWVRLH 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g1536 186 Pfam Cyclin-dependent kinase inhibitor 142 185 IPR003175 GO:0004861|GO:0005634|GO:0051726
Ssu5g1536 186 Gene3D p27 128 186 IPR044898 -
Ssu5g1536 186 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 3 185 IPR044275 GO:0004861|GO:0045736|GO:0051726
Ssu5g1536 186 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 3 185 - -
Ssu5g1536 186 PIRSF CKI_KRP_plant 1 186 IPR044275 GO:0004861|GO:0045736|GO:0051726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g1536 Ssu-Chr5 48213779 48214773 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g1536 141 185 Core Cell Cycle Gene Families AT1G49620 68.889 8.19e-19 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g1536 - - vun:114176886 291.967