Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g1519 ATGGCTCAAGAAGATTTGATATACCCTGTACTCAGCTATGCAAGACGATGTGGTGGACTACTACAAAGGTCTTCACATGCCAATAGTCGGAGGATTAACTACAAAAACTCCGACTCTTTAGTTGATAAAGATCTGAGTCTAAAGGTGCTACGCGTGTGTATGGAGATTATTGCCATTTTCGTTTgcattttcctctttttctcatCCCTTCTTTCGTATCCATTAATAAAGAAACACAAGAAACCCAAAGGCATAGCTAAGCCTAAGCTTCCCCCTGGCTCAATGGGTTGGCCTTACATAGGAGAGACTCTTCAACTCTACTCTCAGGACCCTAACATCTTCTTTGCTTCAAAGCAAAAAAGATAtggagaaattttcaaaacacacGTACTAGGTTGTCCATGCGTGATGCTGGCGAGCCCTGAGGCTGCGCGGTTTGTGTTGGTGACTCATGCTCACTGGTTCAAGCCTACATACCCCAAAAGCAAAGAGAAGCTAATAGGCCCTTCTGCATTGTTCTTTCACCAAGGAGACTACCACACTCGCATTAGGAAGCTGGTGcaaacctctctctctcctgAAACCATCCGAAAACTGATTCCAGACATCGAAACCCAGGTTGTTTCCTCCTTGGAATCGTGGGTTTCAACTGGACAAGTCATTGAAGCTTTCCGGGAAATGAAAAAGTTCTCTTTCAATATTGGCATCCTCTCTGTCTTTGGTTACTTGGAAGGCAATTATAGAGACCAGCTTAAGGAAAACTACTGCATAGTAGAGAAAGGTTACAATTCTTTCCCAAACAGGATACCCGGAACTGCATACTCCAAAGCACTCTTGGCAAGAAGGAGAATCAGAGAGATTATAAGTGAGATAATTTGTAAAAGAAAGGAGCAGAGATTGATGGGGAAGGATCTATTAGGCCACTTGCTGAACTACAAGGATGAAAAAGGACAAACGCTAAGTGATGACCAAATTGCTGATAATGTAATTGGGGTAGTATTTGCAGCTCAGGATACTACAGCAAGTGTTCTAACCTGGATTCTCAAGTATCTTCATGATGACCAGAAACTTCTTGAAGCAATAAAAGCAGAGCAAATGGCAGTAGATGAAGCTAACGAAGGAGGGAAGATGCCATTGACATGGGGTCAGACCAAAAATATGCCAATTACTCGTAGGGTGATATTGGAAAGCCTTAGGATGGCAAGTATCATATCATTTACTTTTAGAGAAGCTGTGGTTGATGTAGTGTACAAAGGATATCTTATACCGAAGGGTTGGAAAGTAATGCCACTGTTCAGGAACATCCATCATAATCCAGAATTCCACCCTGCTCCTCACAATTTTGACCCATCTAGGTTTGAGGTTGCTCCAAAGCCCAATACTTTTATGCCATTTGGCAACGGAATGCACTCTTGTCCAGGAAATGAGCTTGCCAAATTGAACATGCTGATTTTAATTCATCATCTAGTAACCAAATACAGGTGGGAGGTAGTGGGATATCAGAACGGAATCCAGTATAGCCCATTCCCAGTCCCTCCTCATGGCCTACCTACACGATTCTGGAGAAACGAATAG 1575 0.4114 MAQEDLIYPVLSYARRCGGLLQRSSHANSRRINYKNSDSLVDKDLSLKVLRVCMEIIAIFVCIFLFFSSLLSYPLIKKHKKPKGIAKPKLPPGSMGWPYIGETLQLYSQDPNIFFASKQKRYGEIFKTHVLGCPCVMLASPEAARFVLVTHAHWFKPTYPKSKEKLIGPSALFFHQGDYHTRIRKLVQTSLSPETIRKLIPDIETQVVSSLESWVSTGQVIEAFREMKKFSFNIGILSVFGYLEGNYRDQLKENYCIVEKGYNSFPNRIPGTAYSKALLARRRIREIISEIICKRKEQRLMGKDLLGHLLNYKDEKGQTLSDDQIADNVIGVVFAAQDTTASVLTWILKYLHDDQKLLEAIKAEQMAVDEANEGGKMPLTWGQTKNMPITRRVILESLRMASIISFTFREAVVDVVYKGYLIPKGWKVMPLFRNIHHNPEFHPAPHNFDPSRFEVAPKPNTFMPFGNGMHSCPGNELAKLNMLILIHHLVTKYRWEVVGYQNGIQYSPFPVPPHGLPTRFWRNE 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g1519 524 SUPERFAMILY Cytochrome P450 87 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g1519 524 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 61 521 - -
Ssu5g1519 524 PRINTS E-class P450 group I signature 462 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g1519 524 PRINTS E-class P450 group I signature 391 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g1519 524 PRINTS E-class P450 group I signature 324 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g1519 524 PRINTS E-class P450 group I signature 431 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g1519 524 PRINTS E-class P450 group I signature 472 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g1519 524 PRINTS E-class P450 group I signature 119 138 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g1519 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 465 474 IPR017972 GO:0005506|GO:0016705
Ssu5g1519 524 Gene3D Cytochrome P450 79 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g1519 524 PRINTS P450 superfamily signature 392 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g1519 524 PRINTS P450 superfamily signature 463 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g1519 524 PRINTS P450 superfamily signature 472 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g1519 524 PRINTS P450 superfamily signature 335 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g1519 524 Pfam Cytochrome P450 91 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g1519 524 PANTHER CYTOCHROME P450 26 61 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g1519 Ssu-Chr5 47919796 47923487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g1519 55 523 Cytochrome P450 AT3G19270 69.296 0.0 688
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g1519 K09843 - gmx:100806350 850.506