Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g1514 ATGAACTTCAGGAACTACGGTGATAACCCCACTTGGGATGCCATGCATGGGAGGACACCGGCGAATGTTACTCTGCTGAGACAGCCGTCAATATACTCCCTCACATTTGATGAGTTTCAGAGCACCATGGGTGGGATTGGGAAGGATTTTGGGTCCATGAACATGGATGAACTCTTGAAAAACATATGGACAGCTGAAGAGACTCAGGCCTTGGCATTTTCAGCTGGTGGGGGAGAAGGGCATAACCCAATTAGTGGTGGCTTGCAAAGACAAGGATCTTTGACATTGCCAAGGACTCTTAGTCAGAAAACAGTTGATGAGGTTTGGAGGGACTTGATCAAAGATAGTGGTGGGCCCAAAGATGGGAGTGGCAATGGTGGTTCATCCATGCCTCAAAGGCAACCAACATTGGGAGAAGTGACTTTGGAGGAGTTTTTGTTGAGAGCTGGGGTTGTTAGAGAAGATGTGCCTCAACAAATTGGAAAACCAAATAACAATGGGTCATGGTTTGATGACTTTCCTAGACCAAACAATAGCACTGGTCTACTTCTTGGGTTTCAACAACCAAATAGAAGTAATGGGAATTTGGGTGAGAGGGTGGTGGAGGGAAATAACTTAGTTCCCAAACAACCTCCTCCTTTATCATTAAACTCAAACGTTAACCACTCCCAGCGACAAGCACAACAGCCACCACTACTTTTCCCAAAGCCAACAACAAATGTAGCTTTTGCTGCTCCTATGCATTTGTTGAACAATGCTCAACTTGCTAGCCCTGCAAGAAGGGGTGCGTTGATGGGAGTTGCGGAGCATTCAATGAATGTTGGAATGGTTGGTTTAGCCACGGCTAATATGACAGCTCCTGGGGCTTCTCCCTCAAGTAAAATATCATCGGATGTAATTACAAGAAGTAATGTAGATACCTCTTCAATGTCACCAGTTCATTATGTAATCAACAGGGGAAGGAAATCCGGTGCCATAGAGAAAGTGGTTGAGAGGAGACAAAGgagaatgataaaaaatagagaatcaGCTGCGAGGTCACGGGCTCGTAAGCAGGCCTACACTTTCGAACTTGAAGCTGAAGTTGCAAAACTTAAGGAATTAAACAGAGAATTACAAAGAAAGCAGGCAGAAATTACGGAAATACAGAAAAATAAGGATATGGACCCTTCATGCCGACCACGAGTAAGTAAAATACAATGCTTGAGAAGGACACTTACTGGACCGTGGTAG 1233 0.4404 MNFRNYGDNPTWDAMHGRTPANVTLLRQPSIYSLTFDEFQSTMGGIGKDFGSMNMDELLKNIWTAEETQALAFSAGGGEGHNPISGGLQRQGSLTLPRTLSQKTVDEVWRDLIKDSGGPKDGSGNGGSSMPQRQPTLGEVTLEEFLLRAGVVREDVPQQIGKPNNNGSWFDDFPRPNNSTGLLLGFQQPNRSNGNLGERVVEGNNLVPKQPPPLSLNSNVNHSQRQAQQPPLLFPKPTTNVAFAAPMHLLNNAQLASPARRGALMGVAEHSMNVGMVGLATANMTAPGASPSSKISSDVITRSNVDTSSMSPVHYVINRGRKSGAIEKVVERRQRRMIKNRESAARSRARKQAYTFELEAEVAKLKELNRELQRKQAEITEIQKNKDMDPSCRPRVSKIQCLRRTLTGPW 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g1514 410 Pfam bZIP transcription factor 332 382 IPR004827 GO:0003700|GO:0006355
Ssu5g1514 410 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 330 381 IPR004827 GO:0003700|GO:0006355
Ssu5g1514 410 Coils Coil 351 385 - -
Ssu5g1514 410 PANTHER ABSCISIC ACID-INSENSITIVE 5-LIKE PROTEIN 7 20 410 - -
Ssu5g1514 410 SUPERFAMILY Leucine zipper domain 332 379 IPR046347 GO:0003700|GO:0006355
Ssu5g1514 410 MobiDBLite consensus disorder prediction 113 136 - -
Ssu5g1514 410 Gene3D - 330 387 - -
Ssu5g1514 410 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 335 350 IPR004827 GO:0003700|GO:0006355
Ssu5g1514 410 MobiDBLite consensus disorder prediction 122 136 - -
Ssu5g1514 410 SMART brlzneu 328 392 IPR004827 GO:0003700|GO:0006355
Ssu5g1514 410 CDD bZIP_plant_BZIP46 332 386 - -
Ssu5g1514 410 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 20 410 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g1514 Ssu-Chr5 47742282 47745141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g1514 25 410 bZIP Transcription Factor Family AT1G49720 49.510 8.74e-103 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ssu5g1514 bZIP_1 1.3e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g1514 K14432 - gmx:100776600 629.402