Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g1464 ATGGCCATGGTGGTGGTGGGACCCCCCCAACTTGCATCCAATTCTAACCTTTCTGGTCATCCTGATCAGTGTGCTATGTTTGCTGCGGAGGCCTTCCATTTGTTCGGTTACCTTCCCTTTCTAGGAACCCATCCCCACCTCAAATTTGATAAGCTTACACAAGTTTATGGTCCAATCTTCAAGCTCATGCTGGGAACCAAAACATTCGAGGTGGTTACTTCACCCTCTCTGGTGAAAGAGTTAGTGCATGACCAAGACACCATATTTGCCAACCGTGACCCTCCCATTTCTGTATTAGTTGCCTCGTATGGTGGCACTGACATAGCATCTTTGCCTCATGGTCCACAGTGGAGGAAGGCTCGCAAGATATTGGTGCGTGAGATGCTCAGCAACACAAATATCAGTAACTCTTTTTCTCATAGGAGGGTGGAGGTTAAGAAATCCATCAAAGATGTTTATGAGAAGAAAATAGGGCGCCCCATAAATGTTGGTGAGTTGGCCTTTCTAACAGCTACAAATTTAATAATGAGTATGATTTGGGGTGAGACGTTACAGGCAGAAAAGGGGACTGCTAACGGGGCTGAGTTTAGAGCATTGGTGTCAGAACTAATGGTGTTACTAGGCAAGCCAAATATTTCGGATCTTTTCGCCGCACTAGCCTGGTTAGATTTACAAGGAATtgagaaaagaacaagaaaggTCTCTCAATGGATTGATAGGCTCTTTGATTCTGCCATTGAAAAGCGAATGAATGTGACAGGGAAGGGAGAAAATAAGTCAAAGAAGAAAGATTTCCTGCAATATCTGTTGGAGCTTACAAAGAGTGATAGTGATTCAGCATCAATGACCATGAACGAGATCAAGGCCATCCTCATAGTACGTTTCCTAGTCTAA 894 0.4329 MAMVVVGPPQLASNSNLSGHPDQCAMFAAEAFHLFGYLPFLGTHPHLKFDKLTQVYGPIFKLMLGTKTFEVVTSPSLVKELVHDQDTIFANRDPPISVLVASYGGTDIASLPHGPQWRKARKILVREMLSNTNISNSFSHRRVEVKKSIKDVYEKKIGRPINVGELAFLTATNLIMSMIWGETLQAEKGTANGAEFRALVSELMVLLGKPNISDLFAALAWLDLQGIEKRTRKVSQWIDRLFDSAIEKRMNVTGKGENKSKKKDFLQYLLELTKSDSDSASMTMNEIKAILIVRFLV 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g1464 297 SUPERFAMILY Cytochrome P450 33 295 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g1464 297 PANTHER P450, PUTATIVE-RELATED 33 292 - -
Ssu5g1464 297 Pfam Cytochrome P450 32 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g1464 297 Gene3D Cytochrome P450 27 296 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g1464 297 PRINTS E-class P450 group I signature 77 98 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g1464 297 PRINTS E-class P450 group I signature 53 72 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g1464 297 PRINTS E-class P450 group I signature 170 188 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g1464 297 PANTHER OS08G0547900 PROTEIN 33 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g1464 Ssu-Chr5 46653657 46654609 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g1464 34 292 Cytochrome P450 AT4G12320 40.613 1.27e-66 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g1464 - - gmx:100785686 437.573