Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g1439 ATGGAAGCCTGGTTCATCATCCTAGTCTCTCTCTGTGTCGGTGTGCTCATCAGAGCCATCTTCTCCCTTCACTCATCACCCAACCGCAAAGGCATCAGCACCCCTCCCGGCCCTTCCCACATCCCAATCATCACAAGCATCGTATGGCTCCGAAAATCCTTCTCAGAACTGGAGCCAGCACTCCGAACCCTCCACGCGAAATACGGCCCCATCATCACCCTCCCCATCGGCTCTCGCCCCGCCATCTTCATCCGCGATCGCTCCCTCGCCCACCGCGCCCTCATCCAAAACGGCTCCCTCTTCTCCGACCGCCCCAGGGCCCTCCCCGCCGCCAAAATCGTCAGCAGCGACCAGCACAACATCAGCTCCGCCGCCTACGGCGCCACGTGGCGCGCCCTCCGCCGCAACCTCACCTCCGAGATGCTCCACCACTCCCGCGTCAATTCCTTCTCCGGGATCCGCAGGTGGGTCCTCCACTCCCTCCTCGCACGCCTAAAATCCGCCTCCGACTCCAGCGATTCAGTCAGAGTCATCGACCACTTCCAATACGCCATGTTCTGCCTCCTCGTGTTCATGTGCTTCGGGGAAAGGCTCGACGACGGGAAAGTCAGAGACATCGAGCGCGTGCAAAGGCAACAGCTTCTGGGCTTTAACAGGTTCAACGTCCTGAATTTCTGGCCCAGGGTCACTCGCGTCCTGTGCCGCAAGCGTTGGGAGGAGCTGCTGAGGCTGCGGAAGGAGCAGGAGGACGTGTTGGTTCCGCTTATTCGGTCTCGGAAGCAAGCCAAGGAAGGTGGTGGATCAAGCGACGGCGAATTCGTTGTCTCCTATGTGGACACGCTGTTGGATTTGCAGCTGCCGGAGGAGAAACGCAAGCTGAACGAAGGGGAAACTGTGACACTGTGTAGCGAGTTCTTGAACGCGGGTACGGACACGACCTCCACGGCGTTGCAGTGGATCGTGGCGAATTTGGTGAAGCACCCGCACGTGCAGGAGAGGGTGGTGGAGGAGATTAGAACAGTTGTCGGTGAGAGAGAGGAAAGGGAAGTGAAAGAGGAGGAGTTGCAGAAAATGAGCTATCTCAAGTGTGTGATTCTGGAGGGGTTGAGGCGTCACCCGCCGGGGCACTTTGTGCTGCCGCATGCGGTGACTGAGGACGTGGTTTTGAATGATTACTTGGTGCCTAAGGATGGGACGGTGAATTTCATGGTGGCGGAGATGGGGTGGGACCCCAAGGTTTGGGAGGATCCGATGGCGTTTAAGCCCGAGAGGTTTCTGAATGATGAGGAGGGGTTTGATATTACTGGGAGTAAAGAGATTAAGATGATGCCGTTTGGAGCGGGGAGGAGGATTTGTCCTGGGTATAATTTGGCGCTGCTTCATTTGGAGTATTTTGTCGCTAATTTGGTTTGGAATTTTGAGTGGAAGGTTCCGGAGGGACGGGATGTGGATTTGTCGGAGAAGCAGGAGTTCACTGTGGTGATGAAAAATGCATTGCAGGTTCATATTTCTCCTAGGATATAG 1524 0.5636 MEAWFIILVSLCVGVLIRAIFSLHSSPNRKGISTPPGPSHIPIITSIVWLRKSFSELEPALRTLHAKYGPIITLPIGSRPAIFIRDRSLAHRALIQNGSLFSDRPRALPAAKIVSSDQHNISSAAYGATWRALRRNLTSEMLHHSRVNSFSGIRRWVLHSLLARLKSASDSSDSVRVIDHFQYAMFCLLVFMCFGERLDDGKVRDIERVQRQQLLGFNRFNVLNFWPRVTRVLCRKRWEELLRLRKEQEDVLVPLIRSRKQAKEGGGSSDGEFVVSYVDTLLDLQLPEEKRKLNEGETVTLCSEFLNAGTDTTSTALQWIVANLVKHPHVQERVVEEIRTVVGEREEREVKEEELQKMSYLKCVILEGLRRHPPGHFVLPHAVTEDVVLNDYLVPKDGTVNFMVAEMGWDPKVWEDPMAFKPERFLNDEEGFDITGSKEIKMMPFGAGRRICPGYNLALLHLEYFVANLVWNFEWKVPEGRDVDLSEKQEFTVVMKNALQVHISPRI 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g1439 507 SUPERFAMILY Cytochrome P450 35 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g1439 507 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g1439 507 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g1439 507 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g1439 507 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g1439 507 Gene3D Cytochrome P450 28 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g1439 507 Pfam Cytochrome P450 35 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g1439 507 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g1439 507 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g1439 507 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g1439 507 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g1439 507 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g1439 507 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g1439 507 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g1439 507 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g1439 507 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 505 - -
Ssu5g1439 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Ssu5g1439 507 PANTHER CYTOCHROME P450 4 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g1439 Ssu-Chr5 46225696 46227219 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g1439 1 506 Cytochrome P450 AT1G64940 58.674 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g1439 K24184 - gmx:100795683 797.349