Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g1409 ATGGCGAGGTTGAAGGTGTTATCAGCCCTCGACACAGCAAGGACCCAATACTACCACTTCAAAGCCATCATCATAGCGGGGATGGGGCTCTTCACCGATGCCTACGACCTCTTCTCAATCACTCTCATCACCAAGATGATCGGAAGGATATATTACGACCACCGCGAGGGCGAAAACAAGTACGAGACCCCACCGGTGGTGGCGTCCGCCTTGATCGCCGTCGCCCTATTAGGCACCGCCATCGGCCAACTTGTATTCGGAAGGCTCGGCGACCTCAAGGGGCGACGGCGTGTGTACGGTTTCGCCTTGTTGTTGATGGTCTTCGGCTCCTTGGCCTCTGGCTTCTCCATTTGCATAAGAAGAACCTGCGTTCTCCTCACCCTTGGCTTCTTCAGGTTCTTCTTGGGGCTGGGGATTGGGGGAGACTACCCTCTGTCTTCTACCATAATGTCTGAGTTTGCGAACAAAAAGACACGAGGGTCGTTCATAGCGGCGGTGTTTTCGATGCAAGGATTCGGCATATTGGCCTGCTCCACCGTTACGATGGTGGTGTGCTCTATTTTCCGTGCAGCGTCTAAGACATCTGAGGCTGACGTTGCATGGAGGTTGATATTGATGCTGGGTTCATTTCCGGCAGCCATGACCTACTACTGGCGTATGATGATGCCCGAAACTGCTAGGTATACAGCGTTAGTGGAGCAAAATGTGATGCAAGCAGCAAAGGACATGGAGAAAGTCCTTGATGTAACATTGAGCCAGATTGCTGAGGACTATCCATTGCCACCAACCCCACATCCGTACACTCTCCTTTCAAGGGAATTCTTCCGTCGGCACGGTCGTGACCTTTTTGCCTGTTCTTCTACGTGGTTCCTTGTGGACATTGTGTTCTATAGCCAAGTTTTGTTCCAAAGTGAAATATACAAGCGCTACCTCGACAAAAAGGAAGACGTGGATGTGTATCAAGAGGCTTTCCACGTTGCTTGGATCCAAGCCGTTATTGCGGTGTGTTCCACCATCCCTGGCTACTTCTTCTCCGTGTACTTCATTGACAAATGGGGCAGGGTCAAAATCCAAATGATGGGCTTTTTCTTCATGGCATTGGCCTTTTTCGCCATTGGGTTTCCCTATTACTCGTATTGGACCACCgagaaacatgaaaaaaataaagggttCATGGTCCTGTATGGGCTTGCTTTTTTCTTTGCCAATTTTGGGCCCAATACTACCACTTTCATAGTCCCAGCTGAGCTTTTCCCTGCCAGGTTTAGGTCAACGTGTCATGGCATTTCTGGGGCAGCTGGCAAGGTTGGGGCAATCATTGGGTCTGTTGGGTTTCTTTTGGCctcacacaaaataaaagaggaaggGTACCCCAGGGGAATTGGGATGAAAGTGTCCCTTATCATACTTGGAGGGGTGTGCATAGTGGGAATGTTGGTCACCTACTTTTTCACTAGGGAAACCATGGGAAGGTCTTTGGAAGAGAATGAGGTTGAACCCCATGAGGCTGAAGAGTGTGACAATCTTTGA 1530 0.4869 MARLKVLSALDTARTQYYHFKAIIIAGMGLFTDAYDLFSITLITKMIGRIYYDHREGENKYETPPVVASALIAVALLGTAIGQLVFGRLGDLKGRRRVYGFALLLMVFGSLASGFSICIRRTCVLLTLGFFRFFLGLGIGGDYPLSSTIMSEFANKKTRGSFIAAVFSMQGFGILACSTVTMVVCSIFRAASKTSEADVAWRLILMLGSFPAAMTYYWRMMMPETARYTALVEQNVMQAAKDMEKVLDVTLSQIAEDYPLPPTPHPYTLLSREFFRRHGRDLFACSSTWFLVDIVFYSQVLFQSEIYKRYLDKKEDVDVYQEAFHVAWIQAVIAVCSTIPGYFFSVYFIDKWGRVKIQMMGFFFMALAFFAIGFPYYSYWTTEKHEKNKGFMVLYGLAFFFANFGPNTTTFIVPAELFPARFRSTCHGISGAAGKVGAIIGSVGFLLASHKIKEEGYPRGIGMKVSLIILGGVCIVGMLVTYFFTRETMGRSLEENEVEPHEAEECDNL 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g1409 509 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-9-RELATED 2 499 - -
Ssu5g1409 509 Gene3D MFS general substrate transporter like domains 18 508 IPR036259 -
Ssu5g1409 509 ProSiteProfiles Major facilitator superfamily (MFS) profile. 22 489 IPR020846 GO:0022857
Ssu5g1409 509 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 2 499 - -
Ssu5g1409 509 CDD MFS_PhT 23 488 - -
Ssu5g1409 509 SUPERFAMILY MFS general substrate transporter 10 497 IPR036259 -
Ssu5g1409 509 ProSitePatterns Sugar transport proteins signature 2. 134 159 IPR005829 GO:0016021|GO:0022857|GO:0055085
Ssu5g1409 509 Pfam Sugar (and other) transporter 24 497 IPR005828 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g1409 Ssu-Chr5 45475900 45479461 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g1409 1 499 Inorganic Solute Cotransporters AT1G76430 62.764 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g1409 K08176 - gmx:100797683 885.56