Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g1249 ATGGCGGGGAAGTCTGACTCAGTGTCGATCCGCGTTCCCTACAAGAACCTCCGCGACGATTCCTCCGCTCCCGAAGTCGAACTCGTCGACGTCGACCACCGCGGCCACCGGATCCACCACGActcgccgccgccgccgccgaaAAACAACGCCTCCTTGCTCCATCTCGTTCTCAGTTGCACCGTCGCCGCCGGCGTCCAGTTCGGCTGGGCCTTGCAGCTCTCTCTCTTGACGCCCTACATTCAGACATTGGGAATAGGACATGCGTTTTCTTCGTTTATTTGGCTTTGTGGCCCCATTACAGGTCTTGTGGTTCAACCCTGCGTTGGTATTTGGAGTGATAAATGTACTTCAAGGTTTGGCAGAAGACGCCCGTTCATTCTGGCAGGGTCTCTGATGATATCTGTGGCTGTGGTATTGATCGGATTTTCTGCAGACATTGGATATGTATTAGGTGATACAAACGAGCATTGCAGAACATTTAAAGGGACCCGAACAAGGGCTGCTCTTGTGTTTATTCTTGGGTTCTGGATGCTGGACCTTGCTAACAACACAGTGCAGgGGCCAGCTCGAGCACTTTTGGCTGATCTGTCTGGCCCTGATCAACGCAATGTCGCAAATGCTATATTTTGCTCATGGATGGCAGTTGGAAACATCCTCGGATATTCTTCTGGTGCTAGTGGAAAGTGGAACAAATGGTTCCCTTTCTTGACAAATAGAGCTTGCTGTGAAGCCTGTGGCAATCTTAAGGCGGCATTTCTCGTGGCTGTGGTGTTTCTGACATTATGCACACTTGTCACCCTATATTTTGCTAATGAAGTTCCACTTACTACTGAGAGTCAACATCATCGCGTGTCAGATTCTGCTCCTTTATTGGAtgaacaacaaaatggtgttgaattttcaaaatcaaagcCATTATATGTTATGGATGAATCCAATGGTAAGATAAGTGAGAATCATATTGAGAAAGATGTGGAGCTGAAGCATGAGAATTTCAAAGCTGAGGAAGATCATTCTGAAAATTTAATGGATGGGCCTGGAGCAGTACTGGTAAACTTGTTGACAAGTTTAAGGCATTTGCCACCTGCTATGCATTCAGTCTTGATTGTAATGGCTCTCACTTGGTTGTCATGGTTTCCCTTCTTTCTGTTTGATACGGATTGGATGGGGAGAGAAGTTTATCATGGGGATCCAAAAGGGAACACTTCTGAAGTAGATCTTTACGATCAAGGTGTTAGAGAAGGTGCATTTGGTTTGCTATTGAATTCTGTTGTCCTTGGAATTAGCTCTTTCTTCATTGAACCAATGTGTAGGTGTATGGGTGCGAAATTAGTATGGGCAGTGAGCAATTTTATTGTCTTTGTTTGCATGGCTGGCACTGCTATAATTAGTCTAATTTCGGTTCGAGATTACTCTGGAGGGATAGAACATGTAATCGGAGCAAGTGAAGCAATCAAGATTGCTTCCTTGGTTGTGTTTGTTCTTCTTGGTTTTCCTCTTGCGATTACCTATAGTGTTCCCTTTGCTGTCACAGCAGAGTTGACTGCTGATTCAGGTGGTGGCCAAGGATTGGCTATAGGAgttctaaatcttgcaattgttGTTCCTCAGATGATTATATCCCTTGGTTCTGGTCCTTGGGATGCTCTCTTTGGAGGTGGCAATATTCCTGCCTTTGTTTTGGCTTCCCTATGTGCTCTTGCTGGTGGTGTAATTGCAACTCTCAAACTGCCAAATCTGTCTAGCAGTTCATTCAAGTCAACGGGATTTCATATTGGCTAG 1785 0.4364 MAGKSDSVSIRVPYKNLRDDSSAPEVELVDVDHRGHRIHHDSPPPPPKNNASLLHLVLSCTVAAGVQFGWALQLSLLTPYIQTLGIGHAFSSFIWLCGPITGLVVQPCVGIWSDKCTSRFGRRRPFILAGSLMISVAVVLIGFSADIGYVLGDTNEHCRTFKGTRTRAALVFILGFWMLDLANNTVQGPARALLADLSGPDQRNVANAIFCSWMAVGNILGYSSGASGKWNKWFPFLTNRACCEACGNLKAAFLVAVVFLTLCTLVTLYFANEVPLTTESQHHRVSDSAPLLDEQQNGVEFSKSKPLYVMDESNGKISENHIEKDVELKHENFKAEEDHSENLMDGPGAVLVNLLTSLRHLPPAMHSVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNTSEVDLYDQGVREGAFGLLLNSVVLGISSFFIEPMCRCMGAKLVWAVSNFIVFVCMAGTAIISLISVRDYSGGIEHVIGASEAIKIASLVVFVLLGFPLAITYSVPFAVTAELTADSGGGQGLAIGVLNLAIVVPQMIISLGSGPWDALFGGGNIPAFVLASLCALAGGVIATLKLPNLSSSSFKSTGFHIG 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g1249 594 CDD MFS_SLC45_SUC 56 574 - -
Ssu5g1249 594 PANTHER SUCROSE TRANSPORT PROTEIN SUC3 42 594 - -
Ssu5g1249 594 PANTHER SUGAR TRANSPORTER 42 594 - -
Ssu5g1249 594 Pfam MFS/sugar transport protein 71 220 - -
Ssu5g1249 594 Gene3D MFS general substrate transporter like domains 53 577 IPR036259 -
Ssu5g1249 594 SUPERFAMILY MFS general substrate transporter 54 580 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g1249 Ssu-Chr5 41144639 41149693 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g1249 143 594 Sucrose Transporter Gene Family AT2G02860 71.302 0.0 666
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g1249 K15378 - gmx:100793185 1075.08