LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ssu5g1249	ATGGCGGGGAAGTCTGACTCAGTGTCGATCCGCGTTCCCTACAAGAACCTCCGCGACGATTCCTCCGCTCCCGAAGTCGAACTCGTCGACGTCGACCACCGCGGCCACCGGATCCACCACGActcgccgccgccgccgccgaaAAACAACGCCTCCTTGCTCCATCTCGTTCTCAGTTGCACCGTCGCCGCCGGCGTCCAGTTCGGCTGGGCCTTGCAGCTCTCTCTCTTGACGCCCTACATTCAGACATTGGGAATAGGACATGCGTTTTCTTCGTTTATTTGGCTTTGTGGCCCCATTACAGGTCTTGTGGTTCAACCCTGCGTTGGTATTTGGAGTGATAAATGTACTTCAAGGTTTGGCAGAAGACGCCCGTTCATTCTGGCAGGGTCTCTGATGATATCTGTGGCTGTGGTATTGATCGGATTTTCTGCAGACATTGGATATGTATTAGGTGATACAAACGAGCATTGCAGAACATTTAAAGGGACCCGAACAAGGGCTGCTCTTGTGTTTATTCTTGGGTTCTGGATGCTGGACCTTGCTAACAACACAGTGCAGgGGCCAGCTCGAGCACTTTTGGCTGATCTGTCTGGCCCTGATCAACGCAATGTCGCAAATGCTATATTTTGCTCATGGATGGCAGTTGGAAACATCCTCGGATATTCTTCTGGTGCTAGTGGAAAGTGGAACAAATGGTTCCCTTTCTTGACAAATAGAGCTTGCTGTGAAGCCTGTGGCAATCTTAAGGCGGCATTTCTCGTGGCTGTGGTGTTTCTGACATTATGCACACTTGTCACCCTATATTTTGCTAATGAAGTTCCACTTACTACTGAGAGTCAACATCATCGCGTGTCAGATTCTGCTCCTTTATTGGAtgaacaacaaaatggtgttgaattttcaaaatcaaagcCATTATATGTTATGGATGAATCCAATGGTAAGATAAGTGAGAATCATATTGAGAAAGATGTGGAGCTGAAGCATGAGAATTTCAAAGCTGAGGAAGATCATTCTGAAAATTTAATGGATGGGCCTGGAGCAGTACTGGTAAACTTGTTGACAAGTTTAAGGCATTTGCCACCTGCTATGCATTCAGTCTTGATTGTAATGGCTCTCACTTGGTTGTCATGGTTTCCCTTCTTTCTGTTTGATACGGATTGGATGGGGAGAGAAGTTTATCATGGGGATCCAAAAGGGAACACTTCTGAAGTAGATCTTTACGATCAAGGTGTTAGAGAAGGTGCATTTGGTTTGCTATTGAATTCTGTTGTCCTTGGAATTAGCTCTTTCTTCATTGAACCAATGTGTAGGTGTATGGGTGCGAAATTAGTATGGGCAGTGAGCAATTTTATTGTCTTTGTTTGCATGGCTGGCACTGCTATAATTAGTCTAATTTCGGTTCGAGATTACTCTGGAGGGATAGAACATGTAATCGGAGCAAGTGAAGCAATCAAGATTGCTTCCTTGGTTGTGTTTGTTCTTCTTGGTTTTCCTCTTGCGATTACCTATAGTGTTCCCTTTGCTGTCACAGCAGAGTTGACTGCTGATTCAGGTGGTGGCCAAGGATTGGCTATAGGAgttctaaatcttgcaattgttGTTCCTCAGATGATTATATCCCTTGGTTCTGGTCCTTGGGATGCTCTCTTTGGAGGTGGCAATATTCCTGCCTTTGTTTTGGCTTCCCTATGTGCTCTTGCTGGTGGTGTAATTGCAACTCTCAAACTGCCAAATCTGTCTAGCAGTTCATTCAAGTCAACGGGATTTCATATTGGCTAG	1785	0.4364	MAGKSDSVSIRVPYKNLRDDSSAPEVELVDVDHRGHRIHHDSPPPPPKNNASLLHLVLSCTVAAGVQFGWALQLSLLTPYIQTLGIGHAFSSFIWLCGPITGLVVQPCVGIWSDKCTSRFGRRRPFILAGSLMISVAVVLIGFSADIGYVLGDTNEHCRTFKGTRTRAALVFILGFWMLDLANNTVQGPARALLADLSGPDQRNVANAIFCSWMAVGNILGYSSGASGKWNKWFPFLTNRACCEACGNLKAAFLVAVVFLTLCTLVTLYFANEVPLTTESQHHRVSDSAPLLDEQQNGVEFSKSKPLYVMDESNGKISENHIEKDVELKHENFKAEEDHSENLMDGPGAVLVNLLTSLRHLPPAMHSVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNTSEVDLYDQGVREGAFGLLLNSVVLGISSFFIEPMCRCMGAKLVWAVSNFIVFVCMAGTAIISLISVRDYSGGIEHVIGASEAIKIASLVVFVLLGFPLAITYSVPFAVTAELTADSGGGQGLAIGVLNLAIVVPQMIISLGSGPWDALFGGGNIPAFVLASLCALAGGVIATLKLPNLSSSSFKSTGFHIG	594

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ssu5g1249	594	CDD	MFS_SLC45_SUC	56	574	-	-
	Ssu5g1249	594	PANTHER	SUCROSE TRANSPORT PROTEIN SUC3	42	594	-	-
	Ssu5g1249	594	PANTHER	SUGAR TRANSPORTER	42	594	-	-
	Ssu5g1249	594	Pfam	MFS/sugar transport protein	71	220	-	-
	Ssu5g1249	594	Gene3D	MFS general substrate transporter like domains	53	577	IPR036259	-
	Ssu5g1249	594	SUPERFAMILY	MFS general substrate transporter	54	580	IPR036259	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Ssu5g1249	Ssu-Chr5	41144639	41149693	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ssu5g1249	143	594	Sucrose Transporter Gene Family	AT2G02860	71.302	0.0	666

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ssu5g1249	K15378		-	gmx:100793185	1075.08

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