Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g1211 ATGGCTAAGAGTGAGGTGAAATTCATTGGTAAATGGTCCAGTCCTTATGCGATGAGGGTGAAGATTGCTCTCAACATCAAATCCCTTGAACATGAACACTTTGAAGAAACCTTGAACCCCAAAAGTGACCTTCTTCTTCAGTCCAACCCTGTGTATGGCAAAGTCCCAGTTCTCATCCACCATGACAGACCCATCTGTGAGTCTTTGGTCATAGTTGAATACATAGATGAAACTTGGTCCACTGCTCCTTCTATCCTACCTTCTGATCCTTATGATAGAGCTGTTGCTCGCTTCTGGGCTGCTTACATAGACAATAAGTGGTTTCCTTCCATGAAAAGCATTATAACTGTTGAAGGAGAGGAGGAAAGGAAGCCATACTTTGAGGTGTTGGAAGAAGTGCTTGAGAGGATGGAGGATGCCTTTTGGAAATGCAGCAAAGGAAAGCCCTTTTTTGCTGGAGACATGATTGGATTCCTTGATATTGCTTTTGGGTGCTTTCTCGGATGGCTCAGTGTCATAGAGCATAGGTATGAAAGGAAACTGCTGGTTGAAGCAAAGGCTCCTGCTTTGGTGAAATGGGCTGAGAGATTTGCTGCTGACCCTGCTGTGAAGGGCTTATACCTGAGACTGATAAGCTTGTTGAGATTTCCAAGTCTCTTCAGATCAAGTGGAGAGCTGCTATTGGCAAGAAATAGAATTTGGGAGTGGGAGTTTCCTGTGCTAATGATGTTGTTCACTTGTATGATGAATAGTGTGAAAAAATAA 765 0.434 MAKSEVKFIGKWSSPYAMRVKIALNIKSLEHEHFEETLNPKSDLLLQSNPVYGKVPVLIHHDRPICESLVIVEYIDETWSTAPSILPSDPYDRAVARFWAAYIDNKWFPSMKSIITVEGEEERKPYFEVLEEVLERMEDAFWKCSKGKPFFAGDMIGFLDIAFGCFLGWLSVIEHRYERKLLVEAKAPALVKWAERFAADPAVKGLYLRLISLLRFPSLFRSSGELLLARNRIWEWEFPVLMMLFTCMMNSVKK 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g1211 254 SUPERFAMILY GST C-terminal domain-like 85 206 IPR036282 -
Ssu5g1211 254 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 210 IPR045073 -
Ssu5g1211 254 Pfam Glutathione S-transferase, C-terminal domain 98 201 IPR004046 -
Ssu5g1211 254 SFLD Main.3: Omega- and Tau-like 2 207 IPR045073 -
Ssu5g1211 254 SUPERFAMILY Thioredoxin-like 6 108 IPR036249 -
Ssu5g1211 254 Gene3D - 86 222 - -
Ssu5g1211 254 CDD GST_N_Tau 6 79 - -
Ssu5g1211 254 PANTHER GLUTATHIONE S-TRANSFERASE U17 5 210 - -
Ssu5g1211 254 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 220 IPR010987 -
Ssu5g1211 254 SFLD Main (cytGST) 2 207 - -
Ssu5g1211 254 Gene3D Glutaredoxin 1 85 - -
Ssu5g1211 254 Pfam Glutathione S-transferase, N-terminal domain 8 77 IPR004045 -
Ssu5g1211 254 CDD GST_C_Tau 90 204 IPR045074 GO:0004364|GO:0006749
Ssu5g1211 254 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g1211 Ssu-Chr5 39765938 39767490 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g1211 1 216 Glutathione S-transferase Gene Family AT1G10360 57.143 1.72e-87 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g1211 K00799 - cam:101508281 347.821