Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g1210 ATGAAGAGTGAAGTGAAGTTGTTGGGGGCATGGCCAAGTCCATTTGCGATGAGGGCTCGCGTAGCTTTAAACATCAAATCAGTGGAGTACGAATTCCTTGAGGAAAGGTTGGAGGCCAAAAGCCAGCTTCTTCTTCAATCCAAccctattttcaataaaatcccTGTTCTTATTCATCGGGACAAACCCCTTAGCGAGTCTTTGATCATTGTGCAGTATGTGGATGAGGTTTGGTCCTCTGCCTCTCCTATTCTCCCCTCTGATCCTTATGACCGCGCCATTGCTCGTTTCTGGGGTGCCTATATCGATGAAAAGTGGTACCCGACCATGAGATCCATTAGAGGAGCCGAGGGACAGGATGAGAAGAAGAAATTGATAGAGGAGGTGAAAGAAGGATTGGCGTTGCTAGAGGATGTGTTCAAAAATAGCAGCAAAGGCAAGCCGTTTTATGGCGGTGACCAAATTGGGTTCTTGGACATTGCGCTTGGTGGCTTCTTGGGGTGGCTGAGGGTGACAGAAATAGCCAATGGGGTGAAGTTGCTTGACCAGGGCAACACACCTGAGCTGGTGAAATGGGCTGAAAGGTTTTGTGCACATGGTGCTGTCAAAGATGTTATGCCAGAGACGGGGAAGCTTATTGAGTTTGCCAAGACGCTAAAACGCTAA 666 0.4685 MKSEVKLLGAWPSPFAMRARVALNIKSVEYEFLEERLEAKSQLLLQSNPIFNKIPVLIHRDKPLSESLIIVQYVDEVWSSASPILPSDPYDRAIARFWGAYIDEKWYPTMRSIRGAEGQDEKKKLIEEVKEGLALLEDVFKNSSKGKPFYGGDQIGFLDIALGGFLGWLRVTEIANGVKLLDQGNTPELVKWAERFCAHGAVKDVMPETGKLIEFAKTLKR 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g1210 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 219 IPR010987 -
Ssu5g1210 221 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 217 IPR045073 -
Ssu5g1210 221 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Ssu5g1210 221 CDD GST_C_Tau 89 219 IPR045074 GO:0004364|GO:0006749
Ssu5g1210 221 CDD GST_N_Tau 5 78 - -
Ssu5g1210 221 Pfam Glutathione S-transferase, C-terminal domain 101 198 IPR004046 -
Ssu5g1210 221 Gene3D - 85 221 - -
Ssu5g1210 221 SFLD Main (cytGST) 2 220 - -
Ssu5g1210 221 Gene3D Glutaredoxin 1 84 - -
Ssu5g1210 221 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Ssu5g1210 221 SUPERFAMILY Thioredoxin-like 5 108 IPR036249 -
Ssu5g1210 221 PANTHER GLUTATHIONE S-TRANSFERASE U17 4 217 - -
Ssu5g1210 221 SUPERFAMILY GST C-terminal domain-like 76 219 IPR036282 -
Ssu5g1210 221 SFLD Main.3: Omega- and Tau-like 2 220 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g1210 Ssu-Chr5 39756447 39758248 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g1210 3 219 Glutathione S-transferase Gene Family AT1G10370 63.303 3.56e-100 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g1210 K00799 - gmx:121173931 353.599