Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu5g1157 | ATgaaagacaagaaaaagaacCGAAAGCTGGACTTAGCGTTGATGATGGGGAGCCAGAAGAAAGATTTTGCGTGTGACGACGACGTATTGGCGTCGCCGAGGGACGTGTTTGGGGTTCCTATTTCGGGGACGGATTCGGACAGCACAGGGAGCAGTGCCTATAGCGGGCCTGGGTCTCCGGGCATGGGTCCACAACGGGCCCAAGGGAAAGAATGGCAGGTCCAGCAATGGAGGGCGATGATCGATGCGCTGAGGTTCAAGTCCGTTAGAAGATTCTCGACGATTCCTCTGCTTGCGGCGAGCTACGAGATCTCTAAGAGGAGCCTGAGGAACAAGTTGGCGCGTCTTCGCGCCGGTAATTACGACGACGACTTGGATGGCGCTATTGGTATTGACGGTATTCCTACCAAGCCTTCGTGGAGGAACTTCAGCTACGCTGACCTCGCTGCTGCAACCGACGATTTCAGCGCTGAGAACTTGATTGGGAAAGGTGGTCATGCTGAAGTCTACAAAGGATGCTTACCAGATGGTCAAGTTGTAGCAGTAAAGAGGCTAATGAGGAACGAAAAGGAAGCTGAGGACACAGCTGGTGATTTCTTGTCAGAGCTTGGAATCATTGCTCACGTTAACCACCCCAATGCAACACACTTGATTGGGTTTGCGATCGACCATGGCCTCTACTTTGTTCTTCAATTCGCCCCACATGGAAGCCTTGCCTCTTTGCTCTTTGGTTCTGAATGTTTAGAGTGGAAGATAAGGTTTAAAGTCGCTGTTGGGGTAGCAAAAGGATTGCAGTATCTCCACCACGATTGCCCGAGAAGAATCATTCACAGAGACATCAAAGCCTCAAACATATTACTCAACCACAATGATGAAGCTGAGATTTCAGACTTTGGATTGGCAAAGTGGCTCCCAGATAAGTGGGCCCACCATGTTGTCTTCCCAATAGAAGGCACATTCGGGTATTTGGCTCCAGAGTACTTTATGCATGGAATTGTGGATGAGAAGATTGATGTTTTTGCATTTGGGGTTTTGTTACTGGAGCTCATAACAGGTCGTCGTGCAGTTGATTCAAATAGTAGGGAAAGTCTTGTGATCTGGGCCAAACCACTGCTGGATGCAAAGTTGGTCAAAGACATGGCAGACCCCAGATTAGAAGAGAAATATGATCCCACAGAAATGAAGCGTGCCATGGCAACGGCTTCCATGTGTATCCATCACATGTCCTCTAAGCGGCCGTACATGAATCAGGTTGTGCTGCTGCTGAAAGGCGAAGAGGTGGCTATTGAACTCAACCAAAATTCGACATCTCCAAGATCGCTCTTGCTGGATGCATGTGACCTGGAAGATTATACTTGCTCTAATTATTTGAACGACCTCAACCGCCACAAGCAGTTAATCATGGAGTGA | 1410 | 0.4823 | MKDKKKNRKLDLALMMGSQKKDFACDDDVLASPRDVFGVPISGTDSDSTGSSAYSGPGSPGMGPQRAQGKEWQVQQWRAMIDALRFKSVRRFSTIPLLAASYEISKRSLRNKLARLRAGNYDDDLDGAIGIDGIPTKPSWRNFSYADLAAATDDFSAENLIGKGGHAEVYKGCLPDGQVVAVKRLMRNEKEAEDTAGDFLSELGIIAHVNHPNATHLIGFAIDHGLYFVLQFAPHGSLASLLFGSECLEWKIRFKVAVGVAKGLQYLHHDCPRRIIHRDIKASNILLNHNDEAEISDFGLAKWLPDKWAHHVVFPIEGTFGYLAPEYFMHGIVDEKIDVFAFGVLLLELITGRRAVDSNSRESLVIWAKPLLDAKLVKDMADPRLEEKYDPTEMKRAMATASMCIHHMSSKRPYMNQVVLLLKGEEVAIELNQNSTSPRSLLLDACDLEDYTCSNYLNDLNRHKQLIME | 469 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu5g1157 | 469 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 275 | 287 | IPR008271 | GO:0004672|GO:0006468 | |
Ssu5g1157 | 469 | ProSiteProfiles | Protein kinase domain profile. | 155 | 429 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu5g1157 | 469 | SMART | serkin_6 | 155 | 466 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu5g1157 | 469 | SUPERFAMILY | Protein kinase-like (PK-like) | 138 | 427 | IPR011009 | - | |
Ssu5g1157 | 469 | Gene3D | Phosphorylase Kinase; domain 1 | 133 | 230 | - | - | |
Ssu5g1157 | 469 | Pfam | Protein kinase domain | 157 | 418 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu5g1157 | 469 | MobiDBLite | consensus disorder prediction | 38 | 71 | - | - | |
Ssu5g1157 | 469 | Gene3D | Transferase(Phosphotransferase) domain 1 | 234 | 439 | - | - | |
Ssu5g1157 | 469 | ProSitePatterns | Protein kinases ATP-binding region signature. | 161 | 183 | IPR017441 | GO:0005524 | |
Ssu5g1157 | 469 | PANTHER | RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE | 1 | 469 | - | - | |
Ssu5g1157 | 469 | MobiDBLite | consensus disorder prediction | 42 | 58 | - | - | |
Ssu5g1157 | 469 | PANTHER | OS08G0249100 PROTEIN | 1 | 469 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu5g1157 | Ssu-Chr5 | 37265384 | 37271794 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu5g1157 | 139 | 445 | Trihelix Transcription Factor Family | AT5G38560 | 42.138 | 5.23e-70 | 233 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VI | Ssu5g1157 | Pkinase | 1.9e-40 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu5g1157 | - | - | gmx:100794225 | 754.592 |