Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g1154 ATGGCTAAGAGGCTTGGAACTCTAAATGACATGGCTCCAGAGCAATGGGAACCAAAGGTCAAAGGTCCTATGCCCTTTCAAACAAATTCTTGGGGATTGGGTTGCTCCATTGTCAAAATGTTGACTGGTTATCAACCTTGGTATGGATGTCCTATTGGCATAATATACCAGTCGGTTGttgaaaagcaagaaaaaacCCAATATTCCAAGTGGACTTCCTTTTTCAGTGTTAAAGTCAATATTTATAGGTGGGTTCAGTATGTGAACCTTTTTGAGAGTGGCAATTTGATACACCATAGCAGGTTCCAAAAGCATGATGTGAGTTTTGAAATCCTGGGTGATGTTGAAAGATGCAATCATTATTTTGTGTGCAAGAAGTATAAGGAATATGGTTGCTAA 399 0.3784 MAKRLGTLNDMAPEQWEPKVKGPMPFQTNSWGLGCSIVKMLTGYQPWYGCPIGIIYQSVVEKQEKTQYSKWTSFFSVKVNIYRWVQYVNLFESGNLIHHSRFQKHDVSFEILGDVERCNHYFVCKKYKEYGC 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g1154 132 PANTHER OS06G0639500 PROTEIN 1 67 - -
Ssu5g1154 132 Gene3D Transferase(Phosphotransferase) domain 1 1 109 - -
Ssu5g1154 132 PANTHER OS06G0639500 PROTEIN 1 67 - -
Ssu5g1154 132 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Ssu5g1154 132 SUPERFAMILY Protein kinase-like (PK-like) 4 68 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g1154 Ssu-Chr5 37132853 37133396 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g1154 6 57 MAP Kinase Kinase Kinase AT1G05100 33.929 7.29e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g1154 - - gsj:114393396 113.62