Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g1141 ATGAGACGAGAAACGGACGGAGACGACAACGGAACCCGCGGCGGGTCCGAATCCGCACCCGATTCCCTCCTCCGTCCCTGCCTTTCCCTCCTCACGCGCCGCGACTTCACCGCCTGCGGCGACTCCGCCCGCCGGGTCCCGAGATCCGACCCGAACGTCTCCCTCCAGCTGGACCAAATCCTGGCCGTCGCGGACGTCCTCGCGGCCGCCGAGCGCCGCCGCGGCCCCGGCCGCCACCTGGACTGGTACTCCATCCTGCGGCTCCGGCCCGCCGCCGCCGCGGACCGCGACCTCGCGCGGCAGCAGTTCAAGGCCCTGGTGCGCCTCCTGGACCCCAACAAGAACAAGCTCCCCCTCGCCGACGAGGCCCTCATGCGCGTGCGCGAGGCGTGGTGCGTGCTCTCCGACCCCGCGCGCAAGGCCCGCTTCGACCGCGAGATCCGGGACGCCGCCGCGGCGTCGTTTTGGACAATGTGCCCCTACTGCTGGTACCTGCACGAGTACGAGCGGCGGTACGAGGAGTGCACGCTGCGCTGCGCGAACTGTCTCCGGACGTTCCACGGCGCCGTCGTGACGCCGCCGCCGCCGGAGTCGGTCGTGCCCGGGAAGGAGGAGTATTACTGCTACCACGTGAGCTTGCCGCTGAGGTACCCTGTTGGCGAACGGTGTCGTTTTGGGGATGGGGCGAACGACGGGAGGAAGAGGTTGAGGGTTAAAACGGTGGCCAACAGGGTGAAAATGAAAGGGTTTGTTGATGGCAATGGTGACTCTGATTTGGACTAA 783 0.6782 MRRETDGDDNGTRGGSESAPDSLLRPCLSLLTRRDFTACGDSARRVPRSDPNVSLQLDQILAVADVLAAAERRRGPGRHLDWYSILRLRPAAAADRDLARQQFKALVRLLDPNKNKLPLADEALMRVREAWCVLSDPARKARFDREIRDAAAASFWTMCPYCWYLHEYERRYEECTLRCANCLRTFHGAVVTPPPPESVVPGKEEYYCYHVSLPLRYPVGERCRFGDGANDGRKRLRVKTVANRVKMKGFVDGNGDSDLD 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g1141 260 Gene3D DnaJ domain 76 155 IPR036869 -
Ssu5g1141 260 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 2 260 - -
Ssu5g1141 260 Pfam DnaJ domain 81 144 IPR001623 -
Ssu5g1141 260 SMART dnaj_3 80 139 IPR001623 -
Ssu5g1141 260 MobiDBLite consensus disorder prediction 1 22 - -
Ssu5g1141 260 SUPERFAMILY Chaperone J-domain 78 147 IPR036869 -
Ssu5g1141 260 ProSiteProfiles dnaJ domain profile. 81 147 IPR001623 -
Ssu5g1141 260 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 2 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g1141 Ssu-Chr5 36845849 36846631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g1141 3 221 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 35.000 1.35e-41 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g1141 - - gmx:102659715 383.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1862 2 70272895 70273749 Ssu5g1141 5 36845849 36846631 PCT