Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu5g1093 | ATGTCAACACTGAACCAACTTTTTGATCTTCCTGAACAGATATGTTACGTGCAATGTGGATTCTGTACCACAACATTAATGGTAAGCGTCCCATGCAGCAGTTTGTCAATGGTGGTTACAGTCAGATGTGGCCACTGCACAAGCCTCCTCTCTGTTAATATGTTGAAAGCTTCCTTTGTCCCTTTCCACCTGCTAGCTTCCCTTACTCATGTTGAGCCAAAAGAAGGTAGTTCAGAAGATGGTGCAAACAAGACTTTGAACAGCTATAATGCTCCCATAACGATCTATTCTGACTGTGAGGAAGAGAACGTGACTCAAATGAACAATGTCGTGAATAAACCCCCAGAGAAGAGACAGCGAACACCATCTGCTTATAACCGCTTCATCAAAGAAGAGATCAAAAGGCTAAAGGCTGAAAACCCTAACATGGCCCACAAGGAAGCTTTCAGCACTGCGGCAAAAAATCCGGTTGCTTGTATAAGAACCCATTCTTATCTGCTAAAAATGTTAGTCTCCTCCAATAGTGATTTTGGTGGGCCAATTTTCCCCCATCTCAGTGTAAAGGAGATGCAGACAGCTGTAACCGGACAGAGCAACTTGTGGATCTGGACTCCCGCGTAG | 621 | 0.4428 | MSTLNQLFDLPEQICYVQCGFCTTTLMVSVPCSSLSMVVTVRCGHCTSLLSVNMLKASFVPFHLLASLTHVEPKEGSSEDGANKTLNSYNAPITIYSDCEEENVTQMNNVVNKPPEKRQRTPSAYNRFIKEEIKRLKAENPNMAHKEAFSTAAKNPVACIRTHSYLLKMLVSSNSDFGGPIFPHLSVKEMQTAVTGQSNLWIWTPA | 206 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu5g1093 | 206 | Gene3D | High mobility group box domain | 110 | 155 | IPR036910 | - | |
Ssu5g1093 | 206 | PANTHER | PROTEIN YABBY 6-RELATED | 1 | 163 | IPR006780 | GO:0007275 | |
Ssu5g1093 | 206 | PANTHER | AXIAL REGULATOR YABBY 4 | 1 | 163 | - | - | |
Ssu5g1093 | 206 | CDD | HMG-box | 120 | 147 | - | - | |
Ssu5g1093 | 206 | Pfam | YABBY protein | 11 | 155 | IPR006780 | GO:0007275 | |
Ssu5g1093 | 206 | SUPERFAMILY | HMG-box | 108 | 152 | IPR036910 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu5g1093 | Ssu-Chr5 | 34639781 | 34641700 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu5g1093 | 2 | 155 | C2C2-YABBY Transcription Factor Family | AT1G23420 | 64.634 | 2.50e-62 | 192 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-YABBY | Ssu5g1093 | YABBY | 1.5e-56 | CL0114 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu5g1093 | K25796 | - | gmx:100803001 | 279.256 |