Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu5g0954 | ATGTCAGCACCATCAccgtcaccatcaccatcaccggCGTCATTTGCCACCATGCCACCACCACAAGTCTCTTCCCCTGCACCTGACAGTTCAACTTCACCATCCCAGTCTCTATCTCCGGCTACTCCTTCGCTGGCACCACTGCCTCTGGCATCaccttcaccaccaccaccactgccactgcAAACGCCGGCATCAATTTCTCCTCCAGCAGCCCTGCCACCTCCTCAGAGTTCTTCTCCTTCTCCAGCATCTACTACACCTACAAGTACTAGTGCACCTCCTCCTCCTACTAGGATAAGTCCTTTTGATTCTCATTCTCCTCCATCACAAACTTTTGGATTGACTCCACCACCTGCATCAGCACAAAATTCTGGCCCTGGAAACAGTAGTGGCACTGGTGCAGTGGCAGTTGGTGTAGTGACGGGAATTCTACTGCTTGGCTTCATTGGCATTGCTATCTGGTGCCTGACGAGGCAAAAGGAAAGGGTTTCTAAGAGTGGTGGTTATGACTTGCCATCCGCTCTTGGCTCGTCCCctgaatcagATTTGTCCTTTATTAAGATTCGTTCTTCGGCTCCTCTTACACAAAGAGCTTCCGGTGGTAATACACCATCAGGACTAGGCAACTCAAGGTCATTGTTTGCATATGAGGAGCTAATCAAGGCCACAAACAATTTTTCAACTCAAAATCTTTTGGGAGAGGGTGGATTTGGTTGTGTGTATAAAGGATCACTTCCAGATGGGAGAGAGGTAGCAGTTAAGCAACTGAAAATTGAAGGAGGTCAGGGTGAGAGAGAATTCAAAGCTGAAGTGGAAATTATTAGCCGTATACATCACCGTCATTTGGTTTCCTTAGTGGGATACTGCATTTCAGATAACAGAAGACTGCTTGTCTATGACTATGTCCCCAACAATACCCTGTATTTTCATCTTCATGGGGAAGGTAGGCCACTGCTGGACTGGGCAAACCGTGTTAAAATTGCGGCTGGAGCAGCTAGAGGAATAGCTTATCTCCATGAAGACTGCAATCCTCGGATTATTCACAGGGATATCAAGTCAGCAAACATTCTTTTAGACTACAACTTTGAAGCTCGAGTCTCAGATTTTGGGCTGGCCAAATTAGCTGTTGATGCAAATACGCATGTAACCACACGTGTCATGGGAACTTTTGGATGTGTTGCGCCTGAATATGTATCAAGTGGTAAATTGACTGAGAAGTCAGATGTATACTCTTTTGGAGTCATGCTTTTGGAGCTCATTACTGGAAGGAAGCCAGTAGATGTATCTCAACCAGTTGGAGAAGAGAGTCTAGTTGAATGGGCTCGACCTTTGCTAAATGATGCGCTTGATAGTGAGGAATTTGAGAGTTTGATAGATCCAAAGCTAGGAAAGAACTATGTTGAAAGTGAAATGTTTTGCATGATTGAAGTTGCTGCTGCTTGCGTGCGATATTCATCTGCCAAAAGACCTCGCATGGGACAGGTCGTTAGAGCTTTTGATAGTTTAGCTACTTGTGATATTTCAAATGGAATGAGAGTTGGGGACTCTGCGCAGCAATCAGCAGAAATAAGATTATTTCGTAGGATGGCATTTGGATTTGGTAGTCAAGATTATAACGTAGACTTTTTAAGCCACACAGATTAG | 1647 | 0.4323 | MSAPSPSPSPSPASFATMPPPQVSSPAPDSSTSPSQSLSPATPSLAPLPLASPSPPPPLPLQTPASISPPAALPPPQSSSPSPASTTPTSTSAPPPPTRISPFDSHSPPSQTFGLTPPPASAQNSGPGNSSGTGAVAVGVVTGILLLGFIGIAIWCLTRQKERVSKSGGYDLPSALGSSPESDLSFIKIRSSAPLTQRASGGNTPSGLGNSRSLFAYEELIKATNNFSTQNLLGEGGFGCVYKGSLPDGREVAVKQLKIEGGQGEREFKAEVEIISRIHHRHLVSLVGYCISDNRRLLVYDYVPNNTLYFHLHGEGRPLLDWANRVKIAAGAARGIAYLHEDCNPRIIHRDIKSANILLDYNFEARVSDFGLAKLAVDANTHVTTRVMGTFGCVAPEYVSSGKLTEKSDVYSFGVMLLELITGRKPVDVSQPVGEESLVEWARPLLNDALDSEEFESLIDPKLGKNYVESEMFCMIEVAAACVRYSSAKRPRMGQVVRAFDSLATCDISNGMRVGDSAQQSAEIRLFRRMAFGFGSQDYNVDFLSHTD | 548 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu5g0954 | 548 | MobiDBLite | consensus disorder prediction | 28 | 43 | - | - | |
Ssu5g0954 | 548 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
Ssu5g0954 | 548 | ProSitePatterns | Protein kinases ATP-binding region signature. | 233 | 255 | IPR017441 | GO:0005524 | |
Ssu5g0954 | 548 | MobiDBLite | consensus disorder prediction | 1 | 131 | - | - | |
Ssu5g0954 | 548 | SUPERFAMILY | Protein kinase-like (PK-like) | 206 | 498 | IPR011009 | - | |
Ssu5g0954 | 548 | PANTHER | BNACNNG34790D PROTEIN | 22 | 535 | - | - | |
Ssu5g0954 | 548 | Pfam | Protein tyrosine and serine/threonine kinase | 229 | 498 | IPR001245 | GO:0004672|GO:0006468 | |
Ssu5g0954 | 548 | SUPERFAMILY | beta-sandwich domain of Sec23/24 | 5 | 111 | - | - | |
Ssu5g0954 | 548 | ProSiteProfiles | Protein kinase domain profile. | 227 | 503 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu5g0954 | 548 | MobiDBLite | consensus disorder prediction | 46 | 103 | - | - | |
Ssu5g0954 | 548 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 347 | 359 | IPR008271 | GO:0004672|GO:0006468 | |
Ssu5g0954 | 548 | MobiDBLite | consensus disorder prediction | 104 | 131 | - | - | |
Ssu5g0954 | 548 | CDD | STKc_IRAK | 233 | 503 | - | - | |
Ssu5g0954 | 548 | Gene3D | Transferase(Phosphotransferase) domain 1 | 303 | 518 | - | - | |
Ssu5g0954 | 548 | Gene3D | Phosphorylase Kinase; domain 1 | 196 | 302 | - | - | |
Ssu5g0954 | 548 | SMART | serkin_6 | 227 | 473 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu5g0954 | 548 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 22 | 535 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu5g0954 | Ssu-Chr5 | 27871747 | 27876575 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu5g0954 | 124 | 547 | Trihelix Transcription Factor Family | AT5G38560 | 63.288 | 0.0 | 560 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_PERK-1 | Ssu5g0954 | PK_Tyr_Ser-Thr | 1.3e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu5g0954 | - | - | gmx:100799296 | 762.296 |