Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0949 ATGCCATCTCAGATCCTTCCGATGCCGAACCGTCCCTCGGATTCGGCCGTTTCCACTCCTCCAATATTGCTCAGAGCCAAAGAAGACGACAATGACCCGTCAGCGAGTCTCCTGCACTCTCCCCCCTCCTTCCAAGACATGTCCCGCAAGCCTCCCTTGCCCAGGGCCTCGAGCTTCACCGCCACAACGCGCAGCAACAAAGCCTCCCTCAGTGGTCCTCGTTTCTACCAGAAAAGGCGCAGGCGTGCCGCCAGTCAAGACTCCTTGCCCTCCGTTTCCAATGacactgctgccaccaccagATCCTCCTTTGGCCGCGATGTCGCCTCTGAGACCTTCCTCTTGACTCGCCTCGGCTTCAAGATGCTCGGATACCTTGGGGTAGGTTATAAATGGATTACAAGATTTCTTGCCCTTGGTTGTTATGCAGTTCTGCTTTTACCGGGTTTTATTCAAGTTGGATATTACTATTTCTTCTCCAATCAAATACGCAGAAGCATAGTTTATGGAGATAAACCACGAAATAGGCTTGACTTGTATTTACCTAAAAATAGCAATGGTCCAAAACCAGTTGTTGCTTTCGTTACTGGTGGAGCCTGGATTATTGGTTACAAAGCATGGGGTTCTCTTTTAGGTCAACAGTTATCAGAGAGAGATATCATTGTGGCATGCATAGATTACAGAAATTTTCCCCAGGGAACCATCAGTGATATGATAGCTGATGCTTCTCAAGGTATCTCATTTGTGTGCAACAATATTGCAGAATATGGAGGTGACCCTAACAGAATTTACCTAATGGGGCAGTCAGCTGGGGCACACATTGCTGCATGTGCAATTGTGGAACAGGCAATCAAAGAGGCAGGTGAAGGAGAAAGTACTTCTTGGAGTCTTTCCCAGATTAAGGCTTATTTTGGTTTATCTGGAGGGTATAATTTGTTTAACCTAATAGATCACTTCCATGCTAGAGGTCTTTATCGGTCCATCTTTTTAAGCATAATGGAAGGGGAGGAATCCCTGCAACGGTTTTCTCCAGAAGTAATGATTCAAGATCCAAAAATTGGAAATGCGATTTCTCTACTACCTCCTATAGTTCTTTTTCATGGCACTGAGGATTATTCCATACCATCAGATGCCAGTAAAACATTTGCTGAAACTCTTAAAAGATTTGGAGTCACAGCTGAATCAATTATGTACGAAGGGAAGACTCATACAGATGTGTTTCTACAGGATCCCATGAGAGGTGGCAAAGATGATATGTTTGAAGATTTAGTAGCATATATCCACTCTGGTGATGCTGATTCCCGTGCCAGAGATGCAATGGCTCCTCCAAGGAGACGCCTTGTACCTGAATGCATGTTAAAATTGGCTCATAGTGTCAGTCCGTTCTAG 1389 0.4456 MPSQILPMPNRPSDSAVSTPPILLRAKEDDNDPSASLLHSPPSFQDMSRKPPLPRASSFTATTRSNKASLSGPRFYQKRRRRAASQDSLPSVSNDTAATTRSSFGRDVASETFLLTRLGFKMLGYLGVGYKWITRFLALGCYAVLLLPGFIQVGYYYFFSNQIRRSIVYGDKPRNRLDLYLPKNSNGPKPVVAFVTGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTISDMIADASQGISFVCNNIAEYGGDPNRIYLMGQSAGAHIAACAIVEQAIKEAGEGESTSWSLSQIKAYFGLSGGYNLFNLIDHFHARGLYRSIFLSIMEGEESLQRFSPEVMIQDPKIGNAISLLPPIVLFHGTEDYSIPSDASKTFAETLKRFGVTAESIMYEGKTHTDVFLQDPMRGGKDDMFEDLVAYIHSGDADSRARDAMAPPRRRLVPECMLKLAHSVSPF 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0949 462 MobiDBLite consensus disorder prediction 86 101 - -
Ssu5g0949 462 Pfam BD-FAE 177 386 - -
Ssu5g0949 462 MobiDBLite consensus disorder prediction 1 101 - -
Ssu5g0949 462 PANTHER ISOPRENYLCYSTEINE ALPHA-CARBONYL METHYLESTERASE ICMEL1-RELATED 91 452 - -
Ssu5g0949 462 MobiDBLite consensus disorder prediction 55 72 - -
Ssu5g0949 462 SUPERFAMILY alpha/beta-Hydrolases 159 428 IPR029058 -
Ssu5g0949 462 Gene3D alpha/beta hydrolase 159 412 IPR029058 -
Ssu5g0949 462 PANTHER ARYLACETAMIDE DEACETYLASE 91 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0949 Ssu-Chr5 27562135 27576096 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g0949 1 462 Carbohydrate Esterase AT1G26120 65.567 0.0 609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0949 K15889 - gmx:100790850 797.734