Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0924 ATgTTTAAATATTCTGAAGATCTAAATCCAAAAAGATTTTTGACCAGCCCGTCTGTTGGAGTGCTTAATGATGGCTATGATAATGTAAACTCAGATCTTATTTTGACAGTGAATTTTGTCTTGATccatttagagaaaaataaaagATATGTTGTCAAAGATCTCCTTGGCCATGGGACATTTGGACAAGTGGCTAAATGCTGGGATTCAGATACCAACAGTTTTGTTGCTGTGAAGATCATTAAAAATCAACCTGCATACTATCAACAGGCGCTGGTTGAAGTAACTATTTTAACAACGTTAAATAAGAAGTATGATCCTGAGGATAAGCATCACATTGTTcgtatatatgattattttgtatatcAACGACATTTGTGCATTTGCTTTGAATTGCTGGACACAAACTTGTATGAGCTTATCAAGATGAATCATTTTAGGGGATTATCGCTTGGTATTGTTCAGCTATTCTCTAAGCAGaTCTTATGCGGACTGGCTCTACTAAAAGAGGCTGGCATTATTCATTGTGATCTGAAGCCAGAGAACATTCTTTTATGTACGAGCACTGTGAAGCCagcagaaataaaaattattgacttcgGATCAGCATGCATGGAAAACCGCACCGTTTACTCTTATATTCAGAGTCGATACTATAGATCACCTGAGGTTCTTCTTGGATATCAATATACAACAGCTATTGATATGTGGTCCTTTGGGTGCATAGTGGCGGAATTGTTTCTTGGATTACCATTATTCCCTGGGGCTTCAGAATTTGATCTTTTGAAACGGATGATTGAAATACTTGGAGGACAACCACCTGATTATGTACTAAGGGATGCCAAAAACACAAGTAAATTCTTTAAGTGTATCGGGAGTCTCCAGAGCATAGAGAGCAGTGAGAGTTCCAAAATTGGAAGAAGTGTTTATCAAGCATTGACAGCAGAAGAATATGAAGCTAGAGAATTGAAGAAGCCATCAATTGGGAAAGAGTATTTTAATCATATGAACCTTGAAGCAATTGTTACAAACTATCCTTACAGAAAAAACCTACCTAAAGAAGATATTGTCAAAGAAAGTCAAATACGACTGGCTCTTATTGATTTTTTGAAAGGGCTTGTTGAATTCGATCCTGCAAAACGCTGGTCACCCTTTCAGGCTTCAAAACATCCTTTTGTAACTGGGGAACCTTTTACACACCCTTACAAGCCTCCCCCTGAGACTCCTCACATGCCAGTAGTTCAAAATATCAAGGTGGATAATCATCCGGGTGGAGGACACTGGTTTGCGGCTGGTCTATCACCTAATGTTCCAGGCAAAAGCAGAGCTTCCCTCTATAGCAGTCCACATTTTCAGATGGTTCAACATCCGCCTGCTAATAGTTATGGCAGTGTAGGAAGCCATGGGAGCTATAATGATAGTGTTGGGCTTGGTAGCAGCTATGGAAGTTACGGAGAGAGCAGTAACATGTTTGCTTACTATTCACCTATTGGTCCATCTGGTGTGAACATGCACAATCAGGGCAGTATGTCAATGCTTGGGAGTAGTCCGGATGCTAGGAGGAGAGTTAAGTACCAACCTGGGAATGGGCTGGGCATAAGTCCATCAGCTGGAAATTTTGCTCCCCTGCCCCTTGGTGCCAGCCCATCTCAATTCACTCCACCAAGTTCCTATAGTCAGGTTTCAGTTGGTTCCCCGGGACACTATGGACCTACATCTCCTGCAAGAGGAACTTCTCACGGATCACCTTTAGGCAAGACATCTGCAGCTAGCCAGtttaatagaagaaaaaattgggGACATTCTGGAAGTCCACAAACTCAAGAAACAACATTTTCTTCACATTGGCAGGGTCAATATCCTGACAGCTCAAGCCATACTGAGGGAACATCACAAGCTCTTGGCAGTTCACCATCATATCTACAGTCAAATAGTAATCCTGGAAACTGGAAGCAGCGAGGAAGTGGAGGGTTATCTGCTAATCAGAACATTTCATGCTTGGTGAAGCCCAGTGCTACTATGAACTCACAATCAACGGAATTGGTTCATGACAATGTGGAGACAGGCATTTCATTGCCTGATCCTGGAGATTGGGACCCTAATTATAGTGATGAATTGCTTCTTCAAGAGGATGGTTCAGACGAAAGCTGTTTGACAACTGAGTTTGGCAGAAGTATGAATCTTGGTTCTACTGAAACGTGGGCTGGATTTGGAAGGTTCAACCATGTTTCCAGCTCAAACACTCCAATAATCATGCATAGACTAAATGGACCAAGTCAAGCATTTACTAATGTTGAGATGGGAAGCGTTCCGGCACATGATCTTCAAGCAGCATATGTACCCTCCATGTCTAAGCATTTTCATCTCATGCCTCCTCACATTTTACAAAATTCTCCAAGCCGTTTTGGACACCAATCTGTCCAAAGATTCACACATGGTAGACCCCCCCAGGGTACTGAGTGGAGTCAAATTAAGATTCAGACTCCTTCTGGCTTCAGCAGTGTGGGCCCTCGTTCTCCCAGGAATAACTCATTCACCAACAGTATGACATGGGGGCGAAGAATGAACCCTCCTGTTTCAAGCATGCCTCCAACATCCCGCACAAGAAAAGATTATGCAAGGATAGACTAG 2631 0.4105 MFKYSEDLNPKRFLTSPSVGVLNDGYDNVNSDLILTVNFVLIHLEKNKRYVVKDLLGHGTFGQVAKCWDSDTNSFVAVKIIKNQPAYYQQALVEVTILTTLNKKYDPEDKHHIVRIYDYFVYQRHLCICFELLDTNLYELIKMNHFRGLSLGIVQLFSKQILCGLALLKEAGIIHCDLKPENILLCTSTVKPAEIKIIDFGSACMENRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLKRMIEILGGQPPDYVLRDAKNTSKFFKCIGSLQSIESSESSKIGRSVYQALTAEEYEARELKKPSIGKEYFNHMNLEAIVTNYPYRKNLPKEDIVKESQIRLALIDFLKGLVEFDPAKRWSPFQASKHPFVTGEPFTHPYKPPPETPHMPVVQNIKVDNHPGGGHWFAAGLSPNVPGKSRASLYSSPHFQMVQHPPANSYGSVGSHGSYNDSVGLGSSYGSYGESSNMFAYYSPIGPSGVNMHNQGSMSMLGSSPDARRRVKYQPGNGLGISPSAGNFAPLPLGASPSQFTPPSSYSQVSVGSPGHYGPTSPARGTSHGSPLGKTSAASQFNRRKNWGHSGSPQTQETTFSSHWQGQYPDSSSHTEGTSQALGSSPSYLQSNSNPGNWKQRGSGGLSANQNISCLVKPSATMNSQSTELVHDNVETGISLPDPGDWDPNYSDELLLQEDGSDESCLTTEFGRSMNLGSTETWAGFGRFNHVSSSNTPIIMHRLNGPSQAFTNVEMGSVPAHDLQAAYVPSMSKHFHLMPPHILQNSPSRFGHQSVQRFTHGRPPQGTEWSQIKIQTPSGFSSVGPRSPRNNSFTNSMTWGRRMNPPVSSMPPTSRTRKDYARID 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0924 876 SMART serkin_6 50 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu5g0924 876 ProSitePatterns Protein kinases ATP-binding region signature. 56 79 IPR017441 GO:0005524
Ssu5g0924 876 Gene3D Transferase(Phosphotransferase) domain 1 131 394 - -
Ssu5g0924 876 ProSiteProfiles Protein kinase domain profile. 50 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu5g0924 876 CDD PKc_YAK1 50 393 - -
Ssu5g0924 876 Pfam Protein kinase domain 50 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu5g0924 876 MobiDBLite consensus disorder prediction 550 567 - -
Ssu5g0924 876 MobiDBLite consensus disorder prediction 830 876 - -
Ssu5g0924 876 SUPERFAMILY Protein kinase-like (PK-like) 44 416 IPR011009 -
Ssu5g0924 876 MobiDBLite consensus disorder prediction 575 657 - -
Ssu5g0924 876 PANTHER DUAL SPECIFICITY PROTEIN KINASE 2 675 - -
Ssu5g0924 876 PANTHER BNAC04G29850D PROTEIN 2 675 - -
Ssu5g0924 876 MobiDBLite consensus disorder prediction 830 867 - -
Ssu5g0924 876 Gene3D Phosphorylase Kinase; domain 1 15 130 - -
Ssu5g0924 876 MobiDBLite consensus disorder prediction 506 657 - -
Ssu5g0924 876 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0924 Ssu-Chr5 25692403 25711196 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g0924 49 279 MAP Kinase Gene Family AT3G18040 33.740 1.89e-31 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-YAK Ssu5g0924 Pkinase 5.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0924 K18670 - gmx:100792777 1694.86