Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0921 ATGGGCCTGAAGGGTAAATTAAGTGGAGATATTGGTGGACTTACAGAATTGAGATCCTTGGATTTGTCATTTAATAGAGGTTTAACAGGTCCTCTCTCTCCACAGTTAGGAGACCTAAGCAAGCTAAATATTCTGATTTTGGCTGGTTGCGGCTTCAGTGGCAATATTCCAGATGCTTTAGGAAATCTTTCAGAGCTATCTTTCCTGGCTTTAAACTCAAACAACTTCACTGGAAAAATACCTCCTTCATTGGGTAAGCTCTCCAAACTTTATTGGTTGGACTTGGCAGACAATCAGCTGACGGGGCCTATCCCAGTTTCAACCTCCACCACCCCTGGGTTAGACCTTCTTTTAAAGGCTAAGCACTTCCATTTCAATAAGAACCAGCTTTCAGGTTCCATTCCCCACAAGCTTTTCAGCTCTGAGATGATACTCATACACATATTGTTTGATGGAAATAATTTAAGTGGGACTATACCTTCAACAATAGTACTAGTTCAGACCGTTGAGGTTCTCCGGCTTGATAGGAATTTCCTGACAGGAGAGGTCCCATCAAATCTCAACAACCTTACAAACATCAATGAATTGAATTTAGCACATAATAATTTCACTGGTCCTTTGCCTGACTTAACTGGAATGGATACCCTCAACTATGTGGATCTTAGTAACAACTCTTTTGATCCATCTGAAGCTCCAACTTGGTTCAGAACTCTTCAATCACTCACCACTCTTGTCATGGAGTTTGGATCTCTTCAAGGTCCTCTTCCATCGAAACTCTTTGACATTCCTCAAATACAGCAAGTGAAATTACGAAACAATGCATTGAATAATACATTGGACATGGGTGACAACATTTGTCCCCAGTTGCAGCTTGTGGATTTGCAAGACAATGAGATTTCCTCAGTGACACTCAGTTctgaatacaaaaatacattGATTCTTATAGGAAATCCAGTGTGCAATACTGCTCTCTCAAATACAAATTACTGCCAACTTCAGCAACAGCCTAAACAACCCTATTCCACCAGCTTGGCTAATTGTGGAGGAAAATCTTGTCCTCCTGATCAAAAGCTCAGCCCTCAAAGTTGTGAATGTGCCTATCCATATCAAGGAATGCTGTACTTTAGAGGACCCTCATTCAGAGAACTGTCTACTGTAAATACATTCCATTCACTTGAAATGAGCCTATGGGTGAAATTGGGACTAACTCCTGGCTCAGTTtctttacaaaaccccttcttcAATAGTGATGATTATCTTCAAGTGCAACTAGCACTCTTTCCACCAATAGGGCAATATTTTAACAGGTCAGAAGTTCAAAGAATTGGGTTTGAATTGAGTAATCAAACTTACAAGCCTCCAAAAGAGTTTGGACCCTATTACTTTATTGCATTTCCTTATCCTTTCCCAGATTCTCACAAAGGAGCTTCTCTTAGCAAAGGTGTTGTTGTTGGGATAGCAATTGGCTGCACATTTTTGGTTCTGAGCCTCATAGGGTTGGCTATATATGCAATTCTGCAAAAGAAGCGTGCAGAGAGAGCCATTGGATTAAGTAGACCATTTGCATCATGGGCACCAAGTGGCAAGGATAGTGGAGGTGCACCACAATTAAAGGGGGCAAGATGGTTCTCTTATGATGAGCTTAAAAAgtgcaccaacaatttctcTGAAAGCAATGAGATAGGCTTTGGTGGCTATGGCAAGgTGTATAAAGGGGTTCTTCCTGATGGGAAATTGGTTGCAATCAAACGAGCTCAGCAAGGATCAATGCAAGGAGGCCTAGAGTTCAAGACCGAAATTGAGTTGCTTTCAAGAGTTCACCACAAGAATCTTGTTGGCCTCGTGGGATTCTGCTTTGAACAAGGGGAGCAGATGTTGGTTTATGAATTTATGCCCAATGGAACACTTAGGGAGAGTTTGTCAGGGAGATCTGACATTCAGCTTGACTGGAAGAGGAGACTCCGCATTGCTCTTGGTTCAGCCAGAGGACTTGCATACTTACACGAACTTGCTAACCCTCCCATAATCCACAGAGATGTGAAGTCCACTAATATCTTGCTGGATGAAAATTTGACAGCAAAGGTTGCCGATTTTGGCTTGTCCAAGCTTGTATCAGACAGTGAGAAAGGCCATGTTTCAACTCAGGTTAAAGGGACATTGGGTTATCTGGATCCTGAGTATTACATGACCCAACAACTCACTGAGAAGAGTGATGTGTACAGTTTTGGGGTAGTCATGCTTGAACTAATAACTTCAAGACAACCAATTGAGAAGGGAAAGTACATTGTCCGCGAGATGCGCACGCTGATGAATAAGAAGGATGAAGAACACTATGGTTTGAGGGAACTCATGGATCCAGTGGTAAGAAGCACACCAAACCTCATAGGATTTGGGAGGTTCTTAGAGTTGGCAATGCAATGTGTTGAGGAATCAGCTGCAGACCGTCCAACAATGAGTGAAGTTGTGAAAGCACTTGAAACCATTTTGCAGAATGATGGGATGAACACAAACTCTACCTCTGCATCCTCATCTGCCACTGACTTTGGAGTTTCTAAGGGTGGAATGAAGCATCCCTACATTGATGCTACTTTTAGTAAGAAGGACAATGTTAACGATAGTAGTAGTAATGCCTTTGACTACAGCGGGGGGTACACACTTTCAACAAAAGTGGAACCCAAATAG 2682 0.4128 MGLKGKLSGDIGGLTELRSLDLSFNRGLTGPLSPQLGDLSKLNILILAGCGFSGNIPDALGNLSELSFLALNSNNFTGKIPPSLGKLSKLYWLDLADNQLTGPIPVSTSTTPGLDLLLKAKHFHFNKNQLSGSIPHKLFSSEMILIHILFDGNNLSGTIPSTIVLVQTVEVLRLDRNFLTGEVPSNLNNLTNINELNLAHNNFTGPLPDLTGMDTLNYVDLSNNSFDPSEAPTWFRTLQSLTTLVMEFGSLQGPLPSKLFDIPQIQQVKLRNNALNNTLDMGDNICPQLQLVDLQDNEISSVTLSSEYKNTLILIGNPVCNTALSNTNYCQLQQQPKQPYSTSLANCGGKSCPPDQKLSPQSCECAYPYQGMLYFRGPSFRELSTVNTFHSLEMSLWVKLGLTPGSVSLQNPFFNSDDYLQVQLALFPPIGQYFNRSEVQRIGFELSNQTYKPPKEFGPYYFIAFPYPFPDSHKGASLSKGVVVGIAIGCTFLVLSLIGLAIYAILQKKRAERAIGLSRPFASWAPSGKDSGGAPQLKGARWFSYDELKKCTNNFSESNEIGFGGYGKVYKGVLPDGKLVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEFMPNGTLRESLSGRSDIQLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSEKGHVSTQVKGTLGYLDPEYYMTQQLTEKSDVYSFGVVMLELITSRQPIEKGKYIVREMRTLMNKKDEEHYGLRELMDPVVRSTPNLIGFGRFLELAMQCVEESAADRPTMSEVVKALETILQNDGMNTNSTSASSSATDFGVSKGGMKHPYIDATFSKKDNVNDSSSNAFDYSGGYTLSTKVEPK 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0921 893 ProSiteProfiles Protein kinase domain profile. 555 829 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu5g0921 893 ProSitePatterns Protein kinases ATP-binding region signature. 561 583 IPR017441 GO:0005524
Ssu5g0921 893 Gene3D Ribonuclease Inhibitor 110 211 IPR032675 -
Ssu5g0921 893 Gene3D Ribonuclease Inhibitor 1 109 IPR032675 -
Ssu5g0921 893 ProSitePatterns Serine/Threonine protein kinases active-site signature. 675 687 IPR008271 GO:0004672|GO:0006468
Ssu5g0921 893 SMART serkin_6 555 828 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu5g0921 893 Gene3D Phosphorylase Kinase; domain 1 529 630 - -
Ssu5g0921 893 MobiDBLite consensus disorder prediction 866 883 - -
Ssu5g0921 893 CDD STKc_IRAK 561 828 - -
Ssu5g0921 893 SUPERFAMILY L domain-like 4 321 - -
Ssu5g0921 893 Gene3D Ribonuclease Inhibitor 212 330 IPR032675 -
Ssu5g0921 893 MobiDBLite consensus disorder prediction 865 893 - -
Ssu5g0921 893 PANTHER LRR RECEPTOR-LIKE KINASE 1 861 - -
Ssu5g0921 893 Gene3D Transferase(Phosphotransferase) domain 1 631 851 - -
Ssu5g0921 893 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 861 - -
Ssu5g0921 893 Pfam Protein tyrosine and serine/threonine kinase 558 825 IPR001245 GO:0004672|GO:0006468
Ssu5g0921 893 SUPERFAMILY Protein kinase-like (PK-like) 540 837 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0921 Ssu-Chr5 25586521 25591361 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g0921 1 893 Receptor kinase-like Gene Family AT1G79620 73.507 0.0 1366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Ssu5g0921 PK_Tyr_Ser-Thr 3.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0921 - - gmx:100792249 1660.58