Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0859 ATGGTCCTTGGCAAACTCCCCGGCGGCAATAACAACCTCCGAGTCTCCTCCTCCCTGCAGGATCTCTCCTCGTACCGCCGCCTCGACCCCGAACACGGCGCCCTCCCCCACGATTTCAGGAAACCGCACAACTCCAGTTTCTCCAAAACCAAACCGCTCCAAGTCCCCAACCCGGCTCGCCGAAAATGCCTCGCGCCGATCGCGCTcctcctctccctctccctcctcctcctcctcgcCTACGCCCTCTACTCCCGCTGGACCCAAAATTCAGCCAAATACTACGTCGTTCTGGACTGCGGCAGCACGGGGACGCGCGTCTACGTCTACAAGGCCGAGGTATCGCACAGAGACAACACCAACCTTCCCATCGCCGTCGGATCGCTGAACTCCGGGCTGCGGAGGAAGCGCGGGAGCGGGCGCGCCTACGACCGGATGGAGACCGAGCCGGGGCTCGATAAGCTGGTCCGCAACGCGACCGGCCTGAGAGCCGCGCTGAAACCGTTGCTAAAGTGGGCGCAGAAGCAGATTCCAGAAGGTTCTCACGGGAGCACTTCGTTGCTGCTTTACGCCACCGCAGGGGTCAGGAGGCTCCCCTTCGACGACTCCAAGTGGCTGCTCGACAGCGCGTGGAACGTTCTCAAGGGCTCGCCCTTCGTGTGTAGAAGGGATTGGGTTAAGATCATTTCCGGAACCGAAGAGGCTTATTTTGGGTGGATTGCGCTTAATTATGATAGTGGCATTTTGGGGGTTAAGCCTAGGAAAGCGACCTTTGGGGCTCTTGATTTGGGGGGTTCGTCGTTGCAGGTTACGTTCGAGGGTGGCAGGCAACAGTTGAATAGTGAGACGAGTTTGTACGTTAGGATTGGGCCCGTGAACCATCGTTTAACTGCGTATTCACTTGCCGGGTATGGCCTTAACGAGGCGTTCGACAAGTCTGTTGCGCATGTTTTTAAGGAGCTTGGATATAGTGTTGCCGATGTTGTTAAGGGCGATGTGGAGGTCAAGCATCCGTGCCTGCAGAGTGGGTATAAGGAGCGGTTCGCGTGCTCACACTGTTCGGCCGTGGAGAGGGGAGGGGAGAGTCCTAGAGTTGAGGGGAATGTGTTGGGGAAGAAGGGAGGGTTGAGGACTGTGGTGACACTCGTTGGCGCGCCGAATTGGCAGGAGTGCAGCGCGCTTGCGAAGGTTGCCGTGAACTTGTCTGAGTGGTCTGGTGGGAGTCCGGGGCTGGACTGTGAAGTGCACCCGTGTGCTCTTCGTGAGAACCTGCCTCGCCCGGTCGGGCACTTCTATGTGATTTCTGGGTTTTTTGTGGTGTATAGGTTTTTCAACCTGAGTGCAGAGGCCACACTTGAGGATGTGCTGGAGAAGGGGAGGGAATTCTGTGAGAAGAGATGGGATGTTGCGAGGAAGAGTGTTGCCCCTCAGCCCTTTATTGAGCAGTACTGCTTCAGGGCGCCGTATGTTGCGTCGCTGCTGAGGGAGGGCCTGCACATTACTGATAAGCATATAACTGTTGGCTCTGGAAGTATCACTTGGACTCTTGGGGTGGCCTTGTTGGAAGCTGGGAAGGCGTATTCTGTTAGGTTCGGGCTTCGTGGTTTTGACTTGCTTCAGATGAAGATAAATCCACTAGTTCTTATTCCCATTTTGATACTGTCTTTCATCCTGCTGCTTTGTGCTTTGTCATGGGTTGTCAATTGGATGCCGAGATTTTTCCGGAGGCAATATCTTCCATTTTTCAGGCATAACAGTGGCCCCGGTGCATCTGCTCTTAATATCCCATCTCCTTTCCGGTTTCAGCGATGGAGTCCTATCAATTCTGGAGATGGAAGAATAAAGACACCACTCAGTCCAACAATTGCAGGTTCACAGGATAGACCATTTAGCCTGGGGCATGGTCTTGGCGATAACAGTGGCAGCATCCAGCTGATGGAATCTTCCTTTTACCCATCAGCTAGTAGTGTCTCACATAGTTATTCCTCGAACAATTTAGGGCAGATGCAGTTTGACAGCAGTAATATAGGGACATTCTGGTCACCCCACAGAAGCCAGATGCGTCTGCAGAGTAGGAGATCTCAATCTCGAGAAGACCTGAATTCTTCATTGGCCGAGACACACATGGTGAAGGTTTAG 2139 0.5325 MVLGKLPGGNNNLRVSSSLQDLSSYRRLDPEHGALPHDFRKPHNSSFSKTKPLQVPNPARRKCLAPIALLLSLSLLLLLAYALYSRWTQNSAKYYVVLDCGSTGTRVYVYKAEVSHRDNTNLPIAVGSLNSGLRRKRGSGRAYDRMETEPGLDKLVRNATGLRAALKPLLKWAQKQIPEGSHGSTSLLLYATAGVRRLPFDDSKWLLDSAWNVLKGSPFVCRRDWVKIISGTEEAYFGWIALNYDSGILGVKPRKATFGALDLGGSSLQVTFEGGRQQLNSETSLYVRIGPVNHRLTAYSLAGYGLNEAFDKSVAHVFKELGYSVADVVKGDVEVKHPCLQSGYKERFACSHCSAVERGGESPRVEGNVLGKKGGLRTVVTLVGAPNWQECSALAKVAVNLSEWSGGSPGLDCEVHPCALRENLPRPVGHFYVISGFFVVYRFFNLSAEATLEDVLEKGREFCEKRWDVARKSVAPQPFIEQYCFRAPYVASLLREGLHITDKHITVGSGSITWTLGVALLEAGKAYSVRFGLRGFDLLQMKINPLVLIPILILSFILLLCALSWVVNWMPRFFRRQYLPFFRHNSGPGASALNIPSPFRFQRWSPINSGDGRIKTPLSPTIAGSQDRPFSLGHGLGDNSGSIQLMESSFYPSASSVSHSYSSNNLGQMQFDSSNIGTFWSPHRSQMRLQSRRSQSREDLNSSLAETHMVKV 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0859 712 MobiDBLite consensus disorder prediction 685 712 - -
Ssu5g0859 712 Pfam GDA1/CD39 (nucleoside phosphatase) family 88 521 IPR000407 GO:0016787
Ssu5g0859 712 Gene3D - 84 230 - -
Ssu5g0859 712 MobiDBLite consensus disorder prediction 33 53 - -
Ssu5g0859 712 Gene3D Exopolyphosphatase. Domain 2 231 509 - -
Ssu5g0859 712 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 38 684 IPR000407 GO:0016787
Ssu5g0859 712 PANTHER GDA1/CD39 NUCLEOSIDE PHOSPHATASE FAMILY PROTEIN 38 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0859 Ssu-Chr5 22645985 22652227 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g0859 8 712 Nodulin-like Gene Family AT4G19180 60.251 0.0 813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0859 - - gmx:100809597 1097.03