Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0854 ATGTCGTCTTCTGGTTATGCTACAAGCAGTGCTTTGTTTTTTCTGTTTCTCACTGTGCTTGTTGCAAAAGTTAGCTTTTGCTCTTCTACCAAGGTTTATGTAGCGTACATGGGAGGCAAAACTGGGGAACACCCAGATGATATTCTGAAGGAAAATCATCAAATGCTTGCTGCTGTACACAGTGGAAGCATTGAACAAGCCCAAGCTTCTCATGTTTATAGCTACAGACATGGTTTCAGAGGCTTTGCAGCCAAGCTCAGTGATGAACAGGCTTCCCAAATTTCTAAAATGCCAGGAGTGGTTTCTGTTTTTCCCAATTCTAAAAGAAAGCTGCACACAACTCATTCATGGGATTTCATGGGACTTCTTGATGACCAAACCATGGAGACTCTTGGGTACTCCATCAGAAACCAAGAAAATATCATCATTGGTTTCATTGATACTGGAATTTGGCCAGAATCCCCAAGCTTCAGTGACACCGACATGCCTGCAGTGCCACCAGGCTGGAAGGGCCAATGTCAATCAGGGGAAGCATTCAATGCCTCATCTTGCAACAGGAAAGTGATTGGAGCTAGATACTACATGAGTGGATATGAAGCTGAGGAAGAGTCAGATGCAAAAATCTCCTTCAGATCTGCAAGGGATAGCACTGGTCATGGGAGCCACACAGCCTCTATAGCTGCAGGGCGCTATGTGGCAAACATGAATTACAAGGGACTGGCAGCTGGAGGAGCCAGGGGAGGTGCACCAATGGCCAGAATTGCTGTGTACAAAACATGTTGGGATTCTGGTTGTTATGATGTGGACTTGCTAGCTGCCTTTGATGATGCCATAAGAGATGGGGTTCACATTTTGTCTCTATCTCTGGGTGCTGAATCACCTCAAGGAGACTACTTCAGTGACGCCATTTCTGTGGGGTCATTTCATGCTGCTAGTCGTGGGGTGCTGGTTGTTGCATCAGCTGGAAATGAAGGGAATGCTGGTTCTGCCACAAACCTTGCACCATGGATGCTCACTGTTGCTGCCAGCTCAACAGATAGGGATTTCACCTCCGATATCATATTGGGAAATGGTGCTAAAATCATGGGTGAGAGTCTCAGTCTCTTTGAAATGAATGCCTCCACAAGGGTAATTTCTGCTTCTGCAGCCAATGGAGGATACTTTACTCCTTATCAATCCAGTTACTGTTTGGAGAGTTCTCTGAATAAAACAAAGAGCAAAGGCAAGGTTCTGGTGTGTAGGCATGTAGAGAGTTCAACAGAGTCAAAGGTTCAAAAGAGCAAGGTAGTGAAAGATGCAGGTGGAGTTGGCATGATACTTATTGATGAGACAGATCAAGATGTTGCCATCCCATTTGTGATCCCTTCAGCTATTGTTGGAAAGAAAACAGGAGAACGGATTCTATCCTATCTCAAGACCACACGTAAGCCAGTATCAAGGATATTTGGAGCAAAGACAGTTCTAGGAGCTCATCCTGCACCACGTGTAGCAGCATTTTCTTCTAAAGGCCCCAATGCTTTAAACCCAGAAATTCTGAAGCCTGATGTCACAGCTCCAGGACTGAATATCCTTGCAGCATGGTCTCCAGCAGCTGGAAACATGTTCAACATTCTCTCAGGATCTTCTATGGCTTGTCCTCATGTAACTGGAATAGCAACCTTAGTCAAAGCTGTCCATCCTTCATGGTCTCCATCTGCTATCAAATCTGCCATCATGACTACTGCTACAATTCTGGACAAGAACCACAGACCCATCATTGCAGATCCAGAACAAAGAAGGGCTAATGCATTTGATTACGGATCAGGGTTTGTGAACCCTGCAAGAGTTCTTGATCCTGGTCTCATCTATGACTCAGAGCCAGCAGATTTTGTTGCATTCCTGTGTTCAATTGGTTATGATCAGCGGTCACTCCATCAAGTTACAAGAGACAACAGCACGTGTGATGGTAGGGCATTCAGTACAGCATCTGACCTCAACTACCCATCTATTGCAGTGCCAAATCTTAAAGACAACTTCTCAGTTACTAGGATTGTAACCAATGTTGGCAAAGCAAGAAGTGTTTACAAAGCAGTAGTGTCTTCTCCACCTGGTGTTAATGTCAGTGTTACACCTAACTGGTTAATCTTCACAAGAATGGGGCAGAAAATGAAATTCACTGTGAATTTCAATATAACTGCTCCCTCAAAGGGATATGCATTTGGGTTCTTGTCATGGAGGAATAGAAGATCACAAGTCACTAGTCCTTTGGTTGTCCAGGTTGCACCTGGAAAAAATGGGTTGGTCAGATAG 2289 0.4456 MSSSGYATSSALFFLFLTVLVAKVSFCSSTKVYVAYMGGKTGEHPDDILKENHQMLAAVHSGSIEQAQASHVYSYRHGFRGFAAKLSDEQASQISKMPGVVSVFPNSKRKLHTTHSWDFMGLLDDQTMETLGYSIRNQENIIIGFIDTGIWPESPSFSDTDMPAVPPGWKGQCQSGEAFNASSCNRKVIGARYYMSGYEAEEESDAKISFRSARDSTGHGSHTASIAAGRYVANMNYKGLAAGGARGGAPMARIAVYKTCWDSGCYDVDLLAAFDDAIRDGVHILSLSLGAESPQGDYFSDAISVGSFHAASRGVLVVASAGNEGNAGSATNLAPWMLTVAASSTDRDFTSDIILGNGAKIMGESLSLFEMNASTRVISASAANGGYFTPYQSSYCLESSLNKTKSKGKVLVCRHVESSTESKVQKSKVVKDAGGVGMILIDETDQDVAIPFVIPSAIVGKKTGERILSYLKTTRKPVSRIFGAKTVLGAHPAPRVAAFSSKGPNALNPEILKPDVTAPGLNILAAWSPAAGNMFNILSGSSMACPHVTGIATLVKAVHPSWSPSAIKSAIMTTATILDKNHRPIIADPEQRRANAFDYGSGFVNPARVLDPGLIYDSEPADFVAFLCSIGYDQRSLHQVTRDNSTCDGRAFSTASDLNYPSIAVPNLKDNFSVTRIVTNVGKARSVYKAVVSSPPGVNVSVTPNWLIFTRMGQKMKFTVNFNITAPSKGYAFGFLSWRNRRSQVTSPLVVQVAPGKNGLVR 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0854 762 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 21 755 - -
Ssu5g0854 762 Pfam PA domain 394 467 IPR003137 -
Ssu5g0854 762 Pfam Fibronectin type-III domain 657 751 IPR041469 -
Ssu5g0854 762 ProSiteProfiles Serine proteases, subtilase domain profile. 116 610 - -
Ssu5g0854 762 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 21 755 IPR045051 -
Ssu5g0854 762 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 112 IPR037045 -
Ssu5g0854 762 SUPERFAMILY Subtilisin-like 111 614 IPR036852 GO:0004252|GO:0006508
Ssu5g0854 762 Gene3D - 627 754 - -
Ssu5g0854 762 CDD Peptidases_S8_3 110 576 IPR034197 -
Ssu5g0854 762 Gene3D - 346 488 - -
Ssu5g0854 762 Pfam Subtilase family 139 578 IPR000209 GO:0006508|GO:0008236
Ssu5g0854 762 Pfam Peptidase inhibitor I9 32 112 IPR010259 -
Ssu5g0854 762 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Ssu5g0854 762 PRINTS Subtilisin serine protease family (S8) signature 539 555 IPR015500 -
Ssu5g0854 762 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Ssu5g0854 762 CDD PA_subtilisin_like 352 481 - -
Ssu5g0854 762 Gene3D Peptidase S8/S53 domain 140 623 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0854 Ssu-Chr5 22488746 22493230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g0854 8 752 Subtilisin-like Serine Gene Family AT4G10520 42.500 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0854 - - gmx:100819201 1390.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0854 5 22488746 22493230 Ssu5g0854 5 22488746 22493230 ECH