Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0823 ATGGTGGAGCTCAAGAAGCTGCTAGACTCAGAGGGTGCAAAACAAAGCATAGACCGACTTGAGCTAAAAAGCTTTTGGGGTCTGTTCCTACTGAGTGGCATAGCATGCTTCATTAATCTCCTTTCCTATGTTATTAGAATGGCCTACCGTTTTATCAGGCACTCCAATAGTAACCTTGAAAGCTCATCACGCTCAACTCGTCTTCGATCATTCCTTTCCTTtgtcaacgaaaaagaagggGAGGACAAATACAGGCCAAAGGAGAAGTGCTGCTGTAGAAAGGTCAGTCATGACGTTATGAGTGTCATTAGTCATTACCCCTCAAAATTTGGATGGTCATCTATCTTCCTACATGGAAAAGATTACTCTACCAATCGTGATCAAATTTTAGGTTCTCCAAGTGTCCCCGACTCTAGCCACAACTTGGTCCCCTTTGCTCTTGTTCTAGCCAAGAAGCTATCTGATCTTGTCATTACTTCTTTTCCTATTGATACCTCTGCACTTGTTCCTCAAAACAACATCCTTGAATGCTCTCGGGAAGTCTCTAACAATGTTTGA 558 0.4122 MVELKKLLDSEGAKQSIDRLELKSFWGLFLLSGIACFINLLSYVIRMAYRFIRHSNSNLESSSRSTRLRSFLSFVNEKEGEDKYRPKEKCCCRKVSHDVMSVISHYPSKFGWSSIFLHGKDYSTNRDQILGSPSVPDSSHNLVPFALVLAKKLSDLVITSFPIDTSALVPQNNILECSREVSNNV 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0823 185 PANTHER GLUTAMATE RECEPTOR 8 89 - -
Ssu5g0823 185 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 8 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0823 Ssu-Chr5 21349092 21351927 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g0823 4 85 Ion Channels AT3G51480 44.828 3.96e-16 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0823 K05387 - gmx:100789442 122.479