Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0819 ATGTCCGTCGTAAAGTACAAAAAACTGTCACTTGGTCTTGTTTCATGGTTGTGCTGTGGTTGTGTGGCTGTGGCTTCAAGTGAGAGTAGTAGTGGTTCAAAAGACCTTGATCAGACACCAACATGGGCTGTGGCTTGTGTTTGCACTGTTTTCATCTTGATATCCTTAACTCTGGAGAAAAGCCTTCACAAAGTGGGAACGTGGCTACGGGAAAAGCACAAGAAGGCTTTGCTTGAGGCTTTGGAAAAGGTCAAAGCTGagTTGATGATTCTTGGTTTCCTTTCACTGCTTCTGACTTTCGGGCAGAGTTACATTGTTAGAATATGTATTCCTGTCCACGTGGCAGACAAACTGTTGCCATGTCCATATACTGGTACCGGCAAAGCATCGAGTAGTGAAAGTGAAGAGGAAAACCGTAGGAAACTTCTTTCTTATGAACGCAGATATTTGTCAGATGATGGTACCTCTTACCATTGCAAGGAGGGATATCAGCCACTTATATCTGTCAATGGATTGCACCAGTTACACATCCTCATATTCTTCTTAGCAGTCCTTCATGTGTTTTACAGTGCTGTCACAATGCTTCTTGGGAGACTAAAGATTCGAGGATGGAAGACATGGGAGGAGGAGACTTCATCTCATGGGTATGAGTTTGCCAATGATCCTTCAAGATTCCGGCTTACACATGAAACATCATTTGTGAGAGCTCATGCTTCTTTTTGGACAAGAAATCCAATCTTCTTCTATATAGGCTGCTTCTTTAGACAATTTTATAGGTCTGTGGGCAAGGCTGACTACTTGGCTTTGCGCAATGGATTTATCACTGTCCATTTGTCTCCTGGAAGTAAATTTAACTTccaaaagtatatcaaaagatcCTTGGAGGATGACTTCAAGGTGGTTGTTGGAGTCAGTCCTGTCCTCTGGGCATCATTTGTTGTTTTCCTGCTCCTAAATGTTGAGGGATGGCGTGCTATTGTCTGGGCATCCTTAATTCCTGTTGTTATGATTTTGGCTGTTGGAACAAAGCTCCAAGCCGCATTGGCAAATATGGCTATTGAAATCACAGAAAGACATGCAGTTGTTCAAGGGATTCCACTTGTTCAAGGCTCAGACAGATATTTTTGGTTTGGTCGGCCTCAGTTAGTTCTTCATCTTATCCATTTTGCTTTGTTCCAGaATGCAGTCCAAATAACATATTTCCTGTGGATATGGTATTCTTTTGGGCTGAAAAACTGTTTCCATGCAGACTACAAGCTTGCAATAGTTAAAGTAGCTTTAGGCTTTGGGGTGCTAGGCCTCTGCAGCTACATCACCCTTCCATTATATGCTCTTGTTACTCAGATGGGCTCAAGaatgaaaaaatcaatatttgatGAACAAACTTCAAAGGCCTTAAAGAAATGGCACATGGCTGTGAAAAAGAAGCAGGGACTGAAACTTGGAAATTCCAGGGTGCGAGCCATGGATGGAAGCACCACTGATTCAACAAAACACTCTTCCGGCCCCACACTACACCGTTTCAAAACTACCGGTCACTCAACTCGCACCATGTCTCCCTATGATGACCAAGATGACTACCAATCTGACACTGAATTGTCTCCTATTTCACCAACATCAAACTTGATAGTAAGAGTGGACCATGATGAGCAAGAAGCagcaaaagaaaatgaacaCCACCCAACAGCCAACAATCAATAG 1701 0.4174 MSVVKYKKLSLGLVSWLCCGCVAVASSESSSGSKDLDQTPTWAVACVCTVFILISLTLEKSLHKVGTWLREKHKKALLEALEKVKAELMILGFLSLLLTFGQSYIVRICIPVHVADKLLPCPYTGTGKASSSESEEENRRKLLSYERRYLSDDGTSYHCKEGYQPLISVNGLHQLHILIFFLAVLHVFYSAVTMLLGRLKIRGWKTWEEETSSHGYEFANDPSRFRLTHETSFVRAHASFWTRNPIFFYIGCFFRQFYRSVGKADYLALRNGFITVHLSPGSKFNFQKYIKRSLEDDFKVVVGVSPVLWASFVVFLLLNVEGWRAIVWASLIPVVMILAVGTKLQAALANMAIEITERHAVVQGIPLVQGSDRYFWFGRPQLVLHLIHFALFQNAVQITYFLWIWYSFGLKNCFHADYKLAIVKVALGFGVLGLCSYITLPLYALVTQMGSRMKKSIFDEQTSKALKKWHMAVKKKQGLKLGNSRVRAMDGSTTDSTKHSSGPTLHRFKTTGHSTRTMSPYDDQDDYQSDTELSPISPTSNLIVRVDHDEQEAAKENEHHPTANNQ 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0819 566 MobiDBLite consensus disorder prediction 487 541 - -
Ssu5g0819 566 PANTHER MLO-LIKE PROTEIN 19 560 - -
Ssu5g0819 566 MobiDBLite consensus disorder prediction 545 559 - -
Ssu5g0819 566 MobiDBLite consensus disorder prediction 484 566 - -
Ssu5g0819 566 Pfam Mlo family 34 501 IPR004326 GO:0006952|GO:0016021
Ssu5g0819 566 PANTHER MLO-LIKE PROTEIN 1 19 560 IPR004326 GO:0006952|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0819 Ssu-Chr5 21189177 21194793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g0819 22 566 MLO family AT2G17480 61.982 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0819 K08472 - gmx:100814443 982.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0819 5 21189177 21194793 Ssu5g0819 5 21189177 21194793 ECH
Ssu2g2145 2 77364345 77368962 Ssu5g0819 5 21189177 21194793 ECH
Ssu2g2145 2 77364345 77368962 Ssu5g0819 5 21189177 21194793 PCT