Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu5g0811 | ATGTCGTGTTCTTCTTCATCTGGGTCTGAAGAGGACGATGAGGGGTTCGACTCCTACCGGAAAGGAGGGTACCACGCCGTCAGAGTCGCCGATCAATTCGCCGGCGGCAGGTACATAGCGCAGAGGAAACTCGGTTGGGGTCAGTTTTCCACCGTTTGGCTTGCCTATGATACTACAACATCTGCATATGTTGCTCTCAAGATCCAGAAAAGTGCGGCCCAGTTTGTTCAGGCCGCCCTTCATGAAATTGATGTTCTTTCATCCCTTGCTGATGGTGTCGATATGGATTCAAAATGTGTTGTCCAGTTGATTGACCACTTTAAGCACACAGGTCCCAATGGTCAGCACCTTTGCATGGTGCTTGAGTTTCTTGGGGATAGCTTGCTTCGTCTAATCAAATATAACCGGTACAAAGGCCTTCCAATGAATAAAGTTAGGGAGATTTGCAAGTGCATTTTGATTGGTTTGGATTATTTGCATAGAGAACATGGTATTGTCCACACAGACCTAAAACCAGAAAATGTTCTTCTGGTTTCTACCATTGATCCTGCCAAAGACCCTGTTAGATCAGGACCCACCCCAATATTAGAGAGGCCCGAGGGAAACATAAATGGTGGAGTTACTAGTCTTATTGAGAAAAAGTTGAAAAGGAGAGCTAGGAGGGCAGTTGCTAAAATATCTGGAAGAAGTGCTTCAATAGGAGGAATTGAAGCTCCAAAGTCTGAGAGAAATATTGATGGGATTGATGTGAGATGCAAGGTGGTAGATTTTGGAAATGCTTGTTGGGCTGATAAGCAGTTTGCAGAAGAAATTCAGACAAGACAGTACAGAGCTCCTGAAGTAATACTGCAGGCTGGTTATTCCTTCTCTGTTGACATGTGGTCTTTCGCTTGTATTGCTTTTGAGCTTGCCACTGGTGATATGTTGTTTACTCCCAAGGTTGGACAAGGTTTTAGTGAGGATGAGGATCACCTCGCCCTGATGATGGAACTCCTTGGAAAGATGCCCCGGAAGATTGCTACTGCTGGAGCAAAATCCAAGGATTTCTTTGACAGACATGGGGATCTCAAAAGGATTCGAAGACTAAAGTTTTGGCCACTAAACAAGTTGTTGATCGATAGATATAAATTTCCAGAGAGCGATGCTCGTGAGTTTTCAGAGTTTCTTTTACCACTCCTCGATTTCGCACCCGAGAAGCGGCCAACTGCACAGCAGTGCCTGCAAAACCCATGGCTCAATGGCAAGGAGTCTACACCAAATGAAAAGAGAATTGAATCTAGTGTGGAGAAGGTGGATGTTGGGATGAGCAACCTTAAAATCAAGGTGGGAAAGTGA | 1335 | 0.4494 | MSCSSSSGSEEDDEGFDSYRKGGYHAVRVADQFAGGRYIAQRKLGWGQFSTVWLAYDTTTSAYVALKIQKSAAQFVQAALHEIDVLSSLADGVDMDSKCVVQLIDHFKHTGPNGQHLCMVLEFLGDSLLRLIKYNRYKGLPMNKVREICKCILIGLDYLHREHGIVHTDLKPENVLLVSTIDPAKDPVRSGPTPILERPEGNINGGVTSLIEKKLKRRARRAVAKISGRSASIGGIEAPKSERNIDGIDVRCKVVDFGNACWADKQFAEEIQTRQYRAPEVILQAGYSFSVDMWSFACIAFELATGDMLFTPKVGQGFSEDEDHLALMMELLGKMPRKIATAGAKSKDFFDRHGDLKRIRRLKFWPLNKLLIDRYKFPESDAREFSEFLLPLLDFAPEKRPTAQQCLQNPWLNGKESTPNEKRIESSVEKVDVGMSNLKIKVGK | 444 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu5g0811 | 444 | Gene3D | Transferase(Phosphotransferase) domain 1 | 92 | 412 | - | - | |
Ssu5g0811 | 444 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 5 | 444 | - | - | |
Ssu5g0811 | 444 | SMART | serkin_6 | 38 | 412 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu5g0811 | 444 | ProSitePatterns | Protein kinases ATP-binding region signature. | 44 | 67 | IPR017441 | GO:0005524 | |
Ssu5g0811 | 444 | ProSiteProfiles | Protein kinase domain profile. | 38 | 412 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu5g0811 | 444 | Gene3D | Phosphorylase Kinase; domain 1 | 24 | 123 | - | - | |
Ssu5g0811 | 444 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 165 | 177 | IPR008271 | GO:0004672|GO:0006468 | |
Ssu5g0811 | 444 | Pfam | Protein kinase domain | 39 | 179 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu5g0811 | 444 | Pfam | Protein kinase domain | 251 | 412 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu5g0811 | 444 | SUPERFAMILY | Protein kinase-like (PK-like) | 32 | 418 | IPR011009 | - | |
Ssu5g0811 | 444 | CDD | STKc_SRPK | 27 | 412 | - | - | |
Ssu5g0811 | 444 | PANTHER | SERINE/THREONINE KINASE FAMILY PROTEIN | 5 | 444 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu5g0811 | Ssu-Chr5 | 20891340 | 20895449 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu5g0811 | 4 | 413 | EF-hand Containing Proteins | AT5G22840 | 51.509 | 1.75e-168 | 483 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_SRPK | Ssu5g0811 | Pkinase | 4.6e-21 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu5g0811 | K08832 | - | gmx:100811724 | 824.313 |